RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA741997" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA741997 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7100229 7100229 PRJNA741997_P_NODE_54386_length_290_cov_1.419355_g53266_i0 PRJNA741997 54386 290 1.419355 4.1161295 Linderina pennispora 61395 Fungi Fungi 182 3.28e-41   NTclustered gi|2028326364|ref|XM_040889366.1| 61395 g53266 i0 80.08 47.0965517241379 251 44 86 5 1 248 335 88 Linderina pennispora catalase (DL89DRAFT_275872), partial mRNA blastn 13658 182 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
8374721 8374721 PRJNA741997_P_NODE_32307_length_383_cov_2.274194_g31187_i0 PRJNA741997 32307 383 2.274194 8.71016302 Linderina pennispora 61395 Fungi Fungi 442 1.859999999999999e-119   NTclustered gi|2028315242|ref|XM_040891245.1| 61395 g31187 i0 87.696 99.9608355091384 382 44 99 2 2 383 628 1006 Linderina pennispora ATP synthase subunit beta, mitochondrial (DL89DRAFT_320930), partial mRNA blastn 38285 442 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
17299531 17299531 PRJNA741997_P_NODE_34754_length_369_cov_1.033784_g33634_i0 PRJNA741997 34754 369 1.033784 3.81466296 Linderina pennispora 61395 Fungi Fungi 217 1.17e-51   NTclustered gi|2028322926|ref|XM_040888010.1| 61395 g33634 i0 80.714 53.5880758807588 280 52 76 2 1 279 637 915 Linderina pennispora 60S ribosomal protein L10-A (DL89DRAFT_268696), partial mRNA blastn 19774 217 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
19848721 19848721 PRJNA741997_P_NODE_81936_length_245_cov_1.529070_g80816_i0 PRJNA741997 81936 245 1.52907 3.7462215 Basidiobolus ranarum 34480 Fungi Fungi 148 2.74e-31   NTclustered gi|358030849|dbj|AB609158.1| 34480 g80816 i0 78.189 83.5387755102041 243 45 98 8 3 241 1027 1265 Basidiobolus ranarum EF2 gene for translation elongation factor 2, partial cds, strain: NRRL 34594 blastn 20467 148 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus ranarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;