RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA741997" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA741997 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14750398 14750398 PRJNA741997_P_NODE_43652_length_328_cov_3.886275_g42532_i0 PRJNA741997 43652 328 3.886275 12.746982 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 62.1 5.13e-5   NTclustered gi|2108033339|gb|CP070763.1| 2053570 g42532 i0 97.222 0.109756097560976 36 1 11 0 174 209 3308309 3308344 MAG: Candidatus Latescibacterota bacterium isolate bin260 chromosome blastn 36 62.1 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
22399139 22399139 PRJNA741997_P_NODE_77258_length_248_cov_0.880000_g76138_i0 PRJNA741997 77258 248 0.88 2.1824 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 54.7 0.006   NTclustered gi|2893356055|emb|OZ220478.1| 2053570 g76138 i0 100 0.116935483870968 29 0 12 0 133 161 1026400 1026372 MAG: Candidatus Latescibacterota bacterium isolate 1cf545fa-d59a-4aa3-98d5-019dd537838a genome assembly, chromosome: 1 blastn 29 54.7 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;