RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA741997" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJNA741997 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9649863 9649863 PRJNA741997_P_NODE_31308_length_390_cov_1.889590_g30188_i0 PRJNA741997 31308 390 1.88959 7.369401 Kipferlia bialata 797122 Fornicata other_Eukaryota 200 1.26e-46   NTclustered gi|339759403|dbj|AB600315.1| 797122 g30188 i0 77.876 35.1410256410256 339 63 85 10 24 356 1174 842 Kipferlia bialata gene for translation elongation factor 2, partial cds, strain: NY0173 blastn 13705 200 1 Eukaryota Metamonada   Fornicata       Kipferlia Kipferlia bialata
10925543 10925543 PRJNA741997_P_NODE_71509_length_251_cov_1.247191_g70389_i0 PRJNA741997 71509 251 1.247191 3.13044941 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 110 1.33e-19   NTclustered gi|2794895333|ref|XM_067923466.1| 135588 g70389 i0 89.535 1.0199203187251 86 9 36 0 2 87 574 659 Histomonas meleagridis XYPPX repeat family protein (GO595_009747), partial mRNA blastn 256 110 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
12200668 12200668 PRJNA741997_P_NODE_12290_length_705_cov_2.637658_g11233_i0 PRJNA741997 12290 705 2.637658 18.5954889 Ergobibamus cyprinoides 926446 Fornicata other_Eukaryota 462 2.75e-125   NTclustered gi|339759377|dbj|AB600301.1| 926446 g11233 i0 79.669 90.0156028368794 664 118 93 14 51 705 1279 624 Ergobibamus cyprinoides gene for beta-tubulin, partial cds, strain: CL blastn 63461 462 1 Eukaryota Metamonada   Fornicata       Ergobibamus Ergobibamus cyprinoides
18573276 18573276 PRJNA741997_P_NODE_58615_length_281_cov_1.245192_g57495_i0 PRJNA741997 58615 281 1.245192 3.49898952 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 54.7 0.007   NTclustered gi|2806450614|ref|XM_068500446.1| 1144522 g57495 i0 100 0.103202846975089 29 0 10 0 70 98 4312 4340 Tritrichomonas foetus uncharacterized protein (TRFO_18903), partial mRNA blastn 29 54.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;