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contig_metadata

20 rows where analysis = "blastn", bioproject = "PRJNA738523" and tax_phylum = "Nematoda"

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tax_superkingdom 1

tax_phylum 1

  • Nematoda · 20 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA738523 · 20 ✖

analysis 1

  • blastn · 20 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
719556 719556 PRJNA738523_P_NODE_541_length_814_cov_69.141700_g484_i0 PRJNA738523 541 814 69.1417 562.813438 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1483 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g484 i0 99.753 56.0307125307125 809 2 99 0 1 809 2469 3277 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 45609 1483 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
719559 719559 PRJNA738523_P_NODE_5821_length_301_cov_1.039474_g5750_i0 PRJNA738523 5821 301 1.039474 3.12881674 Trichinella spiralis 6334 Nematoda Nematoda 213 1.21e-50   NTclustered gi|339246888|ref|XM_003375030.1| 6334 g5750 i0 87.234 0.624584717607973 188 23 62 1 1 187 710 897 Trichinella spiralis putative LIM domain protein (Tsp_04264) mRNA, complete cds blastn 188 213 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
719560 719560 PRJNA738523_P_NODE_601_length_786_cov_2.692847_g542_i0 PRJNA738523 601 786 2.692847 21.16577742 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1408 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g542 i0 98.982 1.37150127226463 786 8 100 0 1 786 8053 8838 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 1078 1408 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
1995600 1995600 PRJNA738523_P_NODE_3162_length_377_cov_1.013158_g3091_i0 PRJNA738523 3162 377 1.013158 3.81960566 Trichinella pseudospiralis 6337 Nematoda Nematoda 287 9.04e-73   NTclustered gi|17646750|gb|AF453521.1|AF453521 6337 g3091 i0 81.556 5.39787798408488 347 64 92 0 31 377 1 347 Trichinella pseudospiralis tropomyosin mRNA, complete cds blastn 2035 287 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella pseudospiralis
3270827 3270827 PRJNA738523_P_NODE_103_length_1532_cov_10.379027_g84_i0 PRJNA738523 103 1532 10.379027 159.00669364 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 2663 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g84 i0 98.042 61.3087467362924 1532 30 100 0 1 1532 5654 7185 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 93925 2663 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
4548034 4548034 PRJNA738523_P_NODE_16544_length_229_cov_3.583333_g16473_i0 PRJNA738523 16544 229 3.583333 8.20583257 Trichinella spiralis 6334 Nematoda Nematoda 231 2.44e-56   NTclustered gi|339253539|ref|XM_003371945.1| 6334 g16473 i0 85.022 0.991266375545852 227 34 99 0 3 229 2159 1933 Trichinella spiralis 6-phosphofructokinase (Tsp_05639) mRNA, complete cds blastn 227 231 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella spiralis
5823139 5823139 PRJNA738523_P_NODE_2525_length_413_cov_1.214706_g2454_i0 PRJNA738523 2525 413 1.214706 5.01673578 Strongyloides papillosus 174720 Nematoda Nematoda 202 3.72e-47   NTclustered gi|690018840|emb|LM526136.1| 174720 g2454 i0 79.649 6.41646489104116 285 54 69 4 49 331 7759 8041 Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0000493 blastn 2650 202 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides papillosus
7098253 7098253 PRJNA738523_P_NODE_4666_length_327_cov_2.354331_g4595_i0 PRJNA738523 4666 327 2.354331 7.69866237 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 604 1.8799999999999993e-168   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g4595 i0 100 1.25382262996942 327 0 100 0 1 327 2253 1927 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 410 604 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
7098258 7098258 PRJNA738523_P_NODE_5346_length_311_cov_0.970588_g5275_i0 PRJNA738523 5346 311 0.970588 3.01852868 Ancylostoma caninum 29170 Nematoda Nematoda 154 7.75e-33   NTclustered gi|86160923|gb|DQ358106.1| 29170 g5275 i0 77.481 0.842443729903537 262 55 84 4 6 265 1628 1369 Ancylostoma caninum paramyosin mRNA, complete cds blastn 262 154 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Ancylostomatidae Ancylostoma Ancylostoma caninum
8372806 8372806 PRJNA738523_P_NODE_1407_length_536_cov_3.939525_g1337_i0 PRJNA738523 1407 536 3.939525 21.115854 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 935 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g1337 i0 98.138 54.8059701492537 537 9 100 1 1 536 984 448 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 29376 935 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
8372853 8372853 PRJNA738523_P_NODE_6047_length_296_cov_1.381166_g5976_i0 PRJNA738523 6047 296 1.381166 4.08825136 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 508 1.36e-139   NTclustered gi|1070586637|gb|KU987805.1| 1904821 g5976 i0 99.288 82.8108108108108 281 2 95 0 16 296 1 281 Pseudocapillaria tomentosa 18S ribosomal RNA gene, partial sequence blastn 24512 508 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
8372855 8372855 PRJNA738523_P_NODE_6307_length_291_cov_2.119266_g6236_i0 PRJNA738523 6307 291 2.119266 6.16706406 Strongyloides ratti 34506 Nematoda Nematoda 193 1.52e-44   NTclustered gi|1376138619|ref|XM_024649534.1| 34506 g6236 i0 82.096 1.38487972508591 229 37 78 4 59 285 1376 1150 Strongyloides ratti Transitional endoplasmic reticulum ATPase (SRAE_1000245600), partial mRNA blastn 403 193 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
9647977 9647977 PRJNA738523_P_NODE_3548_length_360_cov_3.045296_g3477_i0 PRJNA738523 3548 360 3.045296 10.9630656 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 638 2.06e-178   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g3477 i0 98.611 6.53333333333333 360 5 100 0 1 360 12588 12229 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 2352 638 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
12198913 12198913 PRJNA738523_P_NODE_15950_length_241_cov_0.916667_g15879_i0 PRJNA738523 15950 241 0.916667 2.20916747 Strongyloides ratti 34506 Nematoda Nematoda 204 5.66e-48   NTclustered gi|1376157149|ref|XM_024646005.1| 34506 g15879 i0 82.008 34.7634854771784 239 43 99 0 3 241 800 1038 Strongyloides ratti 26S protease regulatory subunit 4 (SRAE_0000015400), partial mRNA blastn 8378 204 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongyloididae Strongyloides Strongyloides ratti
12198948 12198948 PRJNA738523_P_NODE_6510_length_289_cov_1.300926_g6439_i0 PRJNA738523 6510 289 1.300926 3.75967614 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 484 2.2299999999999998e-132   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g6439 i0 97.527 0.97923875432526 283 7 98 0 1 283 9417 9699 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 283 484 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
16022178 16022178 PRJNA738523_P_NODE_793_length_691_cov_3.601942_g728_i0 PRJNA738523 793 691 3.601942 24.88941922 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1171 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g728 i0 97.25 2.18523878437048 691 19 100 0 1 691 11437 10747 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 1510 1171 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
17297608 17297608 PRJNA738523_P_NODE_1594_length_508_cov_4.655172_g1524_i0 PRJNA738523 1594 508 4.655172 23.64827376 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 883 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g1524 i0 98.031 8.67125984251969 508 10 100 0 1 508 972 1479 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 4405 883 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
17297636 17297636 PRJNA738523_P_NODE_574_length_798_cov_5.855172_g516_i0 PRJNA738523 574 798 5.855172 46.72427256 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1345 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g516 i0 97.114 24.5200501253133 797 23 99 0 1 797 4142 4938 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 19567 1345 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
21122124 21122124 PRJNA738523_P_NODE_3597_length_359_cov_1.076923_g3526_i0 PRJNA738523 3597 359 1.076923 3.86615357 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 608 1.609999999999999e-169   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g3526 i0 97.214 1 359 10 100 0 1 359 9754 10112 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 359 608 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa
21122155 21122155 PRJNA738523_P_NODE_757_length_704_cov_8.068146_g693_i0 PRJNA738523 757 704 8.068146 56.79974784 Pseudocapillaria tomentosa 1904821 Nematoda Nematoda 1240 0   NTclustered gi|2095998828|gb|MZ708958.1| 1904821 g693 i0 98.44 2.33238636363636 705 10 100 1 1 704 7909 7205 Pseudocapillaria tomentosa mitochondrion, complete genome blastn 1642 1240 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Capillariidae Pseudocapillaria Pseudocapillaria tomentosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;