RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA738523" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA738523 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4548045 4548045 PRJNA738523_P_NODE_2824_length_394_cov_1.439252_g2753_i0 PRJNA738523 2824 394 1.439252 5.67065288 Lobosporangium transversale 64571 Fungi Fungi 60.2 2.25e-4   NTclustered gi|1227136130|ref|XM_022023699.1| 64571 g2753 i0 100 8.30456852791878 32 0 8 0 184 215 320 289 Lobosporangium transversale hypothetical protein (BCR41DRAFT_350907), mRNA blastn 3272 60.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale
5823098 5823098 PRJNA738523_P_NODE_10745_length_251_cov_0.865169_g10674_i0 PRJNA738523 10745 251 0.865169 2.17157419 Mycotypha africana 64632 Fungi Fungi 52.8 0.023   NTclustered gi|2432570173|ref|XM_053081800.1| 64632 g10674 i0 100 0.111553784860558 28 0 11 0 162 189 1074 1101 Mycotypha africana S-adenosyl-L-methionine-dependent methyltransferase (BDF20DRAFT_883426), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana
22397031 22397031 PRJNA738523_P_NODE_8218_length_272_cov_1.266332_g8147_i0 PRJNA738523 8218 272 1.266332 3.44442304 Rhizomucor pusillus 4840 Fungi Fungi 56.5 0.002   NTclustered gi|2837739639|ref|XM_069378974.1| 4840 g8147 i0 100 0.213235294117647 30 0 11 0 26 55 386 415 Rhizomucor pusillus uncharacterized protein (VTP01DRAFT_10595), partial mRNA blastn 58 56.5 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
24149363 24149363 PRJNA738523_P_NODE_6959_length_284_cov_1.559242_g6888_i0 PRJNA738523 6959 284 1.559242 4.42824728 Eukaryota 2759 Fungi Fungi 54.7 0.007   NTclustered gi|2837738233|ref|XM_069378716.1| 4840 g6888 i0 100 0.697183098591549 29 0 10 0 150 178 139 167 Rhizomucor pusillus uncharacterized protein (VTP01DRAFT_10362), partial mRNA blastn 198 54.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Rhizomucor Rhizomucor pusillus
24945997 24945997 PRJNA738523_P_NODE_2880_length_391_cov_1.694969_g2809_i0 PRJNA738523 2880 391 1.694969 6.62732879 Lobosporangium transversale 64571 Fungi Fungi 217 1.25e-51   NTclustered gi|1227148304|ref|XM_022022265.1| 64571 g2809 i0 82.661 47.3196930946292 248 39 63 3 136 381 820 575 Lobosporangium transversale 40S ribosomal protein S18 (BCR41DRAFT_341854), mRNA blastn 18502 217 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Lobosporangium Lobosporangium transversale

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;