RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA738523" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA738523 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4548053 4548053 PRJNA738523_P_NODE_3964_length_346_cov_1.095238_g3893_i0 PRJNA738523 3964 346 1.095238 3.78952348 Myxidium streisingeri 1542451 Cnidaria other_Eukaryota 640 5.4999999999999996e-179   NTclustered gi|681870004|gb|KM001687.1| 1542451 g3893 i0 100 27.7312138728324 346 0 100 0 1 346 1207 1552 Myxidium streisingeri clone ZF12 18S small subunit ribosomal RNA gene, partial sequence blastn 9595 640 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Myxidium Myxidium streisingeri
21122103 21122103 PRJNA738523_P_NODE_15357_length_242_cov_0.911243_g15286_i0 PRJNA738523 15357 242 0.911243 2.20520806 Zschokkella parasiluri 371530 Cnidaria other_Eukaryota 320 5.41e-83   NTclustered gi|241911760|gb|FJ417066.1| 371530 g15286 i0 91.102 36.9752066115703 236 21 98 0 1 236 1627 1862 Zschokkella parasiluri isolate M0172 28S large subunit ribosomal RNA gene, partial sequence blastn 8948 320 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Myxidiidae Zschokkella Zschokkella parasiluri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;