contig_metadata
17 rows where analysis = "blastn", bioproject = "PRJNA738523" and tax_phylum = "Bacillota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5823109 | 5823109 | PRJNA738523_P_NODE_12605_length_247_cov_1.333333_g12534_i0 | PRJNA738523 | 12605 | 247 | 1.333333 | 3.29333251 | Anoxybacteroides amylolyticum | 294699 | Bacteria | Bacteria | 429 | 8.83e-116 | NTclustered | gi|1024277742|gb|CP015438.1| | 294699 | g12534 | i0 | 97.976 | 879.943319838057 | 247 | 5 | 100 | 0 | 1 | 247 | 2405 | 2159 | Anoxybacteroides amylolyticum strain DSM 15939 chromosome, complete genome | blastn | 217346 | 429 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Anoxybacillaceae | Anoxybacteroides | Anoxybacteroides amylolyticum | ||
| 6301781 | 6301781 | PRJNA738523_P_NODE_16345_length_241_cov_0.869048_g16274_i0 | PRJNA738523 | 16345 | 241 | 0.869048 | 2.09440568 | Geobacillus | 129337 | Bacteria | Bacteria | 440 | 3.959999999999999e-119 | NTclustered | gi|1317793375|gb|CP025074.1| | 1394 | g16274 | i0 | 99.585 | 29.0829875518672 | 241 | 1 | 100 | 0 | 1 | 241 | 2905015 | 2905255 | [Bacillus] caldolyticus strain NEB414 chromosome, complete genome | blastn | 7009 | 440 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Anoxybacillaceae | Geobacillus | [Bacillus] caldolyticus | ||
| 8372792 | 8372792 | PRJNA738523_P_NODE_11227_length_250_cov_0.870056_g11156_i0 | PRJNA738523 | 11227 | 250 | 0.870056 | 2.17514 | Ligilactobacillus agilis | 1601 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|2784030803|gb|CP163515.1| | 1601 | g11156 | i0 | 100 | 0.348 | 29 | 0 | 12 | 0 | 86 | 114 | 1166804 | 1166832 | Ligilactobacillus agilis strain W70 chromosome, complete genome | blastn | 87 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Ligilactobacillus | Ligilactobacillus agilis | ||
| 8850708 | 8850708 | PRJNA738523_P_NODE_11607_length_249_cov_0.875000_g11536_i0 | PRJNA738523 | 11607 | 249 | 0.875 | 2.17875 | Streptococcus | 1301 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|2246565702|gb|CP097843.1| | 1303 | g11536 | i0 | 100 | 339.321285140562 | 249 | 0 | 100 | 0 | 1 | 249 | 17757 | 18005 | Streptococcus oralis strain HP01 chromosome, complete genome | blastn | 84491 | 460 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 9647940 | 9647940 | PRJNA738523_P_NODE_11028_length_250_cov_1.129944_g10957_i0 | PRJNA738523 | 11028 | 250 | 1.129944 | 2.82486 | Veillonella rogosae | 423477 | Bacteria | Bacteria | 374 | 4.2499999999999986e-99 | NTclustered | gi|2446175566|gb|CP117967.1| | 423477 | g10957 | i0 | 93.625 | 14.272 | 251 | 15 | 100 | 1 | 1 | 250 | 1953780 | 1954030 | Veillonella rogosae strain AC2811 AN NA 2 chromosome, complete genome | blastn | 3568 | 374 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Veillonellales | Veillonellaceae | Veillonella | Veillonella rogosae | ||
| 11401386 | 11401386 | PRJNA738523_P_NODE_13729_length_245_cov_1.430233_g13658_i0 | PRJNA738523 | 13729 | 245 | 1.430233 | 3.50407085 | Bacillaceae | 186817 | Bacteria | Bacteria | 448 | 2.41e-121 | NTclustered | gi|1387294402|gb|CP023704.1| | 35841 | g13658 | i0 | 99.592 | 11.0326530612245 | 245 | 1 | 100 | 0 | 1 | 245 | 1205984 | 1205740 | Caldibacillus thermoamylovorans strain SSBM chromosome, complete genome | blastn | 2703 | 448 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Caldibacillus | Caldibacillus thermoamylovorans | ||
| 11401405 | 11401405 | PRJNA738523_P_NODE_7109_length_283_cov_1.152381_g7038_i0 | PRJNA738523 | 7109 | 283 | 1.152381 | 3.26123823 | Bacillus | 1386 | Bacteria | Bacteria | 518 | 2.14e-142 | NTclustered | gi|984728683|gb|CP014179.1| | 1392 | g7038 | i0 | 99.647 | 1220.1554770318 | 283 | 1 | 100 | 0 | 1 | 283 | 12810 | 13092 | Bacillus anthracis strain Stendal chromosome, complete genome | blastn | 345304 | 518 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus anthracis | ||
| 12198884 | 12198884 | PRJNA738523_P_NODE_12210_length_248_cov_0.880000_g12139_i0 | PRJNA738523 | 12210 | 248 | 0.88 | 2.1824 | Geobacillus sp. LC300 | 1519377 | Bacteria | Bacteria | 453 | 5.2600000000000005e-123 | NTclustered | gi|909995672|gb|CP008903.1| | 1519377 | g12139 | i0 | 99.597 | 26.9516129032258 | 248 | 1 | 100 | 0 | 1 | 248 | 1873590 | 1873343 | Geobacillus sp. LC300, complete genome | blastn | 6684 | 453 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Anoxybacillaceae | Geobacillus | Geobacillus sp. LC300 | ||
| 12198900 | 12198900 | PRJNA738523_P_NODE_14170_length_245_cov_0.895349_g14099_i0 | PRJNA738523 | 14170 | 245 | 0.895349 | 2.19360505 | Megasphaera hexanoica | 1675036 | Bacteria | Bacteria | 409 | 1.1399999999999998e-109 | NTclustered | gi|2840670333|gb|CP171746.1| | 1675036 | g14099 | i0 | 96.735 | 704.812244897959 | 245 | 8 | 100 | 0 | 1 | 245 | 2863 | 3107 | Megasphaera hexanoica strain MH chromosome, complete genome | blastn | 172679 | 409 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Veillonellales | Veillonellaceae | Megasphaera | Megasphaera hexanoica | ||
| 12677350 | 12677350 | PRJNA738523_P_NODE_4370_length_334_cov_4.114943_g4299_i0 | PRJNA738523 | 4370 | 334 | 4.114943 | 13.74390962 | root | 1 | Root_unresolved | Root_unresolved | 612 | 1.15e-170 | NTclustered | gi|2484409883|gb|OQ804706.1| | 1282 | g4299 | i0 | 99.701 | 185 | 334 | 1 | 100 | 0 | 1 | 334 | 484 | 817 | Staphylococcus epidermidis strain RPB-57 16S ribosomal RNA gene, partial sequence | blastn | 61790 | 612 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 13951673 | 13951673 | PRJNA738523_P_NODE_16391_length_238_cov_2.757576_g16320_i0 | PRJNA738523 | 16391 | 238 | 2.757576 | 6.56303088 | Streptococcus | 1301 | Bacteria | Bacteria | 440 | 3.899999999999999e-119 | NTclustered | gi|2636419880|gb|CP139875.1| | 1307 | g16320 | i0 | 100 | 100 | 238 | 0 | 100 | 0 | 1 | 238 | 1759554 | 1759317 | Streptococcus suis strain Ss_134 chromosome | blastn | 23800 | 440 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus suis | ||
| 14748456 | 14748456 | PRJNA738523_P_NODE_13612_length_246_cov_0.890173_g13541_i0 | PRJNA738523 | 13612 | 246 | 0.890173 | 2.18982558 | Streptococcus oralis | 1303 | Bacteria | Bacteria | 416 | 6.839999999999999e-112 | NTclustered | gi|2246565702|gb|CP097843.1| | 1303 | g13541 | i0 | 97.154 | 99.6626016260163 | 246 | 7 | 100 | 0 | 1 | 246 | 1937082 | 1937327 | Streptococcus oralis strain HP01 chromosome, complete genome | blastn | 24517 | 416 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus oralis | ||
| 17297569 | 17297569 | PRJNA738523_P_NODE_10114_length_254_cov_1.701657_g10043_i0 | PRJNA738523 | 10114 | 254 | 1.701657 | 4.32220878 | Anaerococcus sp. WGS1579 | 3366809 | Bacteria | Bacteria | 431 | 2.539999999999999e-116 | NTclustered | gi|2831319668|gb|CP171106.1| | 3366809 | g10043 | i0 | 97.244 | 238.110236220472 | 254 | 7 | 100 | 0 | 1 | 254 | 649012 | 649265 | Anaerococcus sp. WGS1579 chromosome, complete genome | blastn | 60480 | 431 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | Anaerococcus sp. WGS1579 | ||
| 17297654 | 17297654 | PRJNA738523_P_NODE_7754_length_276_cov_2.068966_g7683_i0 | PRJNA738523 | 7754 | 276 | 2.068966 | 5.71034616 | Oscillospiraceae bacterium | 2485925 | Bacteria | Bacteria | 459 | 1.28e-124 | NTclustered | gi|2318996694|gb|CP107202.1| | 2485925 | g7683 | i0 | 96.727 | 470.851449275362 | 275 | 9 | 99 | 0 | 1 | 275 | 1023313 | 1023587 | MAG: Oscillospiraceae bacterium isolate KR001_HAM_0051 chromosome, complete genome | blastn | 129955 | 459 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillospiraceae bacterium | |||
| 17775487 | 17775487 | PRJNA738523_P_NODE_11294_length_250_cov_0.870056_g11223_i0 | PRJNA738523 | 11294 | 250 | 0.870056 | 2.17514 | Staphylococcus | 1279 | Bacteria | Bacteria | 435 | 1.92e-117 | NTclustered | gi|1899862668|gb|CP061041.1| | 1292 | g11223 | i0 | 98 | 23 | 250 | 5 | 100 | 0 | 1 | 250 | 1244066 | 1244315 | Staphylococcus warneri strain WS479 chromosome, complete genome | blastn | 5750 | 435 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus warneri | ||
| 23672547 | 23672547 | PRJNA738523_P_NODE_15999_length_241_cov_0.916667_g15928_i0 | PRJNA738523 | 15999 | 241 | 0.916667 | 2.20916747 | Staphylococcus hominis | 1290 | Bacteria | Bacteria | 446 | 8.519999999999999e-121 | NTclustered | gi|2870745991|gb|CP134693.1| | 1290 | g15928 | i0 | 100 | 102.684647302905 | 241 | 0 | 100 | 0 | 1 | 241 | 779461 | 779701 | Staphylococcus hominis strain acrlw chromosome, complete genome | blastn | 24747 | 446 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus hominis | ||
| 25424329 | 25424329 | PRJNA738523_P_NODE_10920_length_250_cov_2.293785_g10849_i0 | PRJNA738523 | 10920 | 250 | 2.293785 | 5.7344625 | Streptococcus | 1301 | Bacteria | Bacteria | 462 | 8.83e-126 | NTclustered | gi|1403375826|emb|LS483375.1| | 1302 | g10849 | i0 | 100 | 327 | 250 | 0 | 100 | 0 | 1 | 250 | 625213 | 625462 | Streptococcus gordonii strain NCTC3165 genome assembly, chromosome: 1 | blastn | 81750 | 462 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus gordonii |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;