RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA738523" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA738523 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1995563 1995563 PRJNA738523_P_NODE_13002_length_247_cov_0.885057_g12931_i0 PRJNA738523 13002 247 0.885057 2.18609079 Cystoisospora suis 483139 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|2795620668|ref|XM_068064364.1| 483139 g12931 i0 96.875 0.356275303643725 32 1 13 0 187 218 1214 1183 Cystoisospora suis uncharacterized protein (CSUI_004171), mRNA blastn 88 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
1995627 1995627 PRJNA738523_P_NODE_6842_length_286_cov_0.957746_g6771_i0 PRJNA738523 6842 286 0.957746 2.73915356 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 206 1.92e-48   NTclustered gi|1673115679|ref|XM_029363146.1| 94643 g6771 i0 84.804 64.8916083916084 204 31 71 0 15 218 204 407 Besnoitia besnoiti ribosomal protein RPS15 (BESB_046950), partial mRNA blastn 18559 206 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
5823118 5823118 PRJNA738523_P_NODE_13865_length_245_cov_0.895349_g13794_i0 PRJNA738523 13865 245 0.895349 2.19360505 Eimeria acervulina 5801 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.022   NTclustered gi|914998678|ref|XM_013392185.1| 5801 g13794 i0 100 0.114285714285714 28 0 11 0 124 151 165 192 Eimeria acervulina hypothetical protein, conserved partial mRNA blastn 28 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
5823165 5823165 PRJNA738523_P_NODE_6785_length_286_cov_1.446009_g6714_i0 PRJNA738523 6785 286 1.446009 4.13558574 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 348 3.0100000000000004e-91   NTclustered gi|820693866|tpe|LN714486.1| 572307 g6714 i0 89.007 99.5734265734266 282 29 98 2 6 286 4893374 4893094 TPA_asm: Neospora caninum Liverpool, chromosome chrXI, complete genome blastn 28478 348 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
8372816 8372816 PRJNA738523_P_NODE_16247_length_241_cov_0.916667_g16176_i0 PRJNA738523 16247 241 0.916667 2.20916747 Cystoisospora suis 483139 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.006   NTclustered gi|2795631966|ref|XM_068070013.1| 483139 g16176 i0 94.286 0.145228215767635 35 2 15 0 18 52 1807 1841 Cystoisospora suis uncharacterized protein (CSUI_009904), mRNA blastn 35 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
19049487 19049487 PRJNA738523_P_NODE_8135_length_273_cov_1.155000_g8064_i0 PRJNA738523 8135 273 1.155 3.15315 Cryptosporidium 5806 SAR_Eukaryotes SAR_Eukaryotes 76.8 1.49e-9   NTclustered gi|67608988|ref|XM_661825.1| 353151 g8064 i0 94 0.871794871794872 50 3 18 0 20 69 361 410 Cryptosporidium hominis TU502 40S ribosomal protein S16 (Chro.20313) partial mRNA blastn 238 76.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium hominis
22396955 22396955 PRJNA738523_P_NODE_11258_length_250_cov_0.870056_g11187_i0 PRJNA738523 11258 250 0.870056 2.17514 Eimeria maxima 5804 SAR_Eukaryotes SAR_Eukaryotes 58.4 4.87e-4   NTclustered gi|915125408|ref|XM_013478514.1| 5804 g11187 i0 100 0.124 31 0 12 0 119 149 142 112 Eimeria maxima hypothetical protein, conserved partial mRNA blastn 31 58.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria maxima
22396990 22396990 PRJNA738523_P_NODE_16618_length_226_cov_2.013072_g16547_i0 PRJNA738523 16618 226 2.013072 4.54954272 Babesia caballi 5871 SAR_Eukaryotes SAR_Eukaryotes 220 5.21e-53   NTclustered gi|2794946644|ref|XM_067860513.1| 5871 g16547 i0 84.513 30.9070796460177 226 31 99 4 1 224 497 274 Babesia caballi 40S ribosomal protein S9, putative (BcabD6B2_39800), partial mRNA blastn 6985 220 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia caballi
22397014 22397014 PRJNA738523_P_NODE_5598_length_306_cov_0.991416_g5527_i0 PRJNA738523 5598 306 0.991416 3.03373296 Babesia caballi 5871 SAR_Eukaryotes SAR_Eukaryotes 110 1.67e-19   NTclustered gi|2794932239|ref|XM_067856838.1| 5871 g5527 i0 81.159 0.450980392156863 138 24 45 2 162 298 560 424 Babesia caballi ribosomal protein RPL18 (BcabD6B2_03030), partial mRNA blastn 138 110 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia caballi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;