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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA738523" and tax_clade = "Discoba"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Discoba · 7 ✖

bioproject 1

  • PRJNA738523 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1197706 1197706 PRJNA738523_P_NODE_1681_length_495_cov_1.696682_g1610_i0 PRJNA738523 1681 495 1.696682 8.3985759 Trypanosoma 5690 Euglenozoa other_Eukaryota 361 7.07e-95   NTclustered gi|61207287|gb|AY785684.1| 5693 g1610 i0 81.448 102.454545454545 442 80 89 2 1 441 830 1270 Trypanosoma cruzi strain MT4167 clone 2 elongation factor 1-alpha (EF-1alpha) gene, partial cds blastn 50715 361 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
8372839 8372839 PRJNA738523_P_NODE_3967_length_346_cov_0.838828_g3896_i0 PRJNA738523 3967 346 0.838828 2.90234488 Bodo saltans 75058 Euglenozoa other_Eukaryota 414 3.63e-111   NTclustered gi|206598205|gb|FJ168554.1| 75058 g3896 i0 89.783 88.7398843930636 323 33 93 0 1 323 14787 15109 Bodo saltans clone fosmid 5M18, complete sequence blastn 30704 414 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
12198889 12198889 PRJNA738523_P_NODE_12630_length_247_cov_0.948276_g12559_i0 PRJNA738523 12630 247 0.948276 2.34224172 Trypanosoma conorhini 83891 Euglenozoa other_Eukaryota 200 7.529999999999999e-47   NTclustered gi|1673142105|ref|XM_029373822.1| 83891 g12559 i0 84.848 6.89473684210526 198 30 80 0 50 247 324 127 Trypanosoma conorhini uncharacterized protein (Tco025E_06955), partial mRNA blastn 1703 200 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma conorhini
16022120 16022120 PRJNA738523_P_NODE_14373_length_244_cov_0.900585_g14302_i0 PRJNA738523 14373 244 0.900585 2.1974274 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 135 2.1200000000000003e-27   NTclustered gi|1624747195|ref|XM_029024526.1| 67003 g14302 i0 78.14 11.4098360655738 215 45 88 2 1 214 47 260 Trypanosoma theileri putative paraflagellar rod protein 3 (TM35_000092870), partial mRNA blastn 2784 135 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
16022187 16022187 PRJNA738523_P_NODE_9953_length_256_cov_1.005464_g9882_i0 PRJNA738523 9953 256 1.005464 2.57398784 Tsukubamonas globosa 875863 Root_unresolved Root_unresolved 394 3.36e-105   NTclustered gi|323575411|dbj|AB576859.1| 875863 g9882 i0 94.841 30.85546875 252 13 98 0 1 252 1957 1706 Tsukubamonas globosa EF2 mRNA for elongation factor 2, partial cds blastn 7899 394 1 Eukaryota Discoba       Tsukubamonadida Tsukubamonadidae Tsukubamonas Tsukubamonas globosa
19846523 19846523 PRJNA738523_P_NODE_4396_length_334_cov_1.180077_g4325_i0 PRJNA738523 4396 334 1.180077 3.94145718 Tsukubamonas globosa 875863 Root_unresolved Root_unresolved 364 3.5599999999999985e-96   NTclustered gi|323575409|dbj|AB576858.1| 875863 g4325 i0 86.471 48.5149700598802 340 37 100 3 1 334 343 679 Tsukubamonas globosa hsp90 mRNA for heat shock protein 90k Da, partial cds blastn 16204 364 1 Eukaryota Discoba       Tsukubamonadida Tsukubamonadidae Tsukubamonas Tsukubamonas globosa
23672602 23672602 PRJNA738523_P_NODE_8699_length_267_cov_1.587629_g8628_i0 PRJNA738523 8699 267 1.587629 4.23896943 Tsukubamonas globosa 875863 Root_unresolved Root_unresolved 359 1.29e-94   NTclustered gi|323575396|dbj|AB576851.1| 875863 g8628 i0 91.698 30.5730337078652 265 13 99 8 1 265 1133 878 Tsukubamonas globosa gene for 18S ribosomal RNA, partial sequence blastn 8163 359 1 Eukaryota Discoba       Tsukubamonadida Tsukubamonadidae Tsukubamonas Tsukubamonas globosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;