RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA737474" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA737474 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25710191 25710191 PRJNA737474d_S_NODE_45738_length_201_cov_4.843750_g45144_i0 PRJNA737474 45738 201 4.84375 9.7359375 Linderina pennispora 61395 Fungi Fungi 100 6.16e-17   NTclustered gi|2028323590|ref|XM_040885143.1| 61395 g45144 i0 78.659 31.9303482587065 164 26 79 8 24 181 734 574 Linderina pennispora putative 60s ribosomal protein l7 (DL89DRAFT_248191), partial mRNA blastn 6418 100 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
26385528 26385528 PRJNA737474b_S_NODE_33543_length_279_cov_5.533981_g32504_i0 PRJNA737474 33543 279 5.533981 15.43980699 Coemansia reversa 61392 Fungi Fungi 189 1.88e-43   NTclustered gi|44936090|gb|AY546685.1| 61392 g32504 i0 80.309 91.8888888888889 259 44 92 6 2 257 1092 838 Coemansia reversa isolate AFTOL-ID 140 18S small subunit ribosomal RNA gene, partial sequence blastn 25637 189 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Coemansia Coemansia reversa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;