RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA737474" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA737474 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26405716 26405716 PRJNA737474g_S_NODE_67119_length_369_cov_3.581081_g65825_i0 PRJNA737474 67119 369 3.581081 13.21418889 Brachionus ibericus 183141 Rotifera other_Eukaryota 71.3 9.68e-8   NTclustered gi|313759937|gb|GU574485.1| 183141 g65825 i0 86.154 3.63685636856369 65 9 18 0 119 183 1669 1733 Brachionus ibericus Hsp60 mRNA, complete cds blastn 1342 71.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus ibericus
26530716 26530716 PRJNA737474f_S_NODE_18760_length_470_cov_10.211587_g18084_i0 PRJNA737474 18760 470 10.211587 47.9944589 Brachionus ibericus 183141 Rotifera other_Eukaryota 71.3 1.26e-7   NTclustered gi|313759937|gb|GU574485.1| 183141 g18084 i0 86.154 2.85531914893617 65 9 14 0 189 253 1733 1669 Brachionus ibericus Hsp60 mRNA, complete cds blastn 1342 71.3 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus ibericus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;