RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA737474" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA737474 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25572561 25572561 PRJNA737474d_S_NODE_14697_length_401_cov_2.289634_g14104_i0 PRJNA737474 14697 401 2.289634 9.18143234 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 246 1.64e-60   NTclustered gi|294933094|ref|XM_002780549.1| 423536 g14104 i0 83.846 24.2269326683292 260 40 65 2 81 339 594 336 Perkinsus marinus ATCC 50983 40S ribosomal protein S5, putative, mRNA blastn 9715 246 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
25851218 25851218 PRJNA737474f_S_NODE_254075_length_244_cov_1.649123_g253397_i0 PRJNA737474 254075 244 1.649123 4.02386012 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 148 2.7299999999999997e-31   NTclustered gi|294900894|ref|XM_002777121.1| 423536 g253397 i0 89.655 20.3565573770492 116 12 48 0 129 244 47 162 Perkinsus marinus ATCC 50983 heat shock protein 90, putative, mRNA blastn 4967 148 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
25991618 25991618 PRJNA737474g_S_NODE_15452_length_817_cov_45.801075_g14329_i0 PRJNA737474 15452 817 45.801075 374.19478275 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 106 6.21e-18   NTclustered gi|294874782|ref|XM_002767050.1| 423536 g14329 i0 93.056 0.134638922888617 72 5 9 0 107 178 8 79 Perkinsus marinus ATCC 50983 60S ribosomal protein L29, putative, mRNA blastn 110 106 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
26131333 26131333 PRJNA737474g_S_NODE_35165_length_481_cov_3.232843_g33878_i0 PRJNA737474 35165 481 3.232843 15.54997483 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 161 7.459999999999998e-35   NTclustered gi|294900894|ref|XM_002777121.1| 423536 g33878 i0 89.683 12.6424116424116 126 13 26 0 85 210 172 47 Perkinsus marinus ATCC 50983 heat shock protein 90, putative, mRNA blastn 6081 161 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;