RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA737474" and tax_phylum = "Hemichordata"

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tax_superkingdom 1

tax_phylum 1

  • Hemichordata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA737474 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25707272 25707272 PRJNA737474c_S_NODE_20674_length_271_cov_1.353535_g19843_i0 PRJNA737474 20674 271 1.353535 3.66807985 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 207 5.01e-49   NTclustered gi|585711471|ref|XM_002741226.2| 10224 g19843 i0 82.773 77.0922509225092 238 35 86 4 34 267 1359 1124 PREDICTED: Saccoglossus kowalevskii tubulin beta chain-like (LOC100378745), mRNA blastn 20892 207 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii
25707787 25707787 PRJNA737474c_S_NODE_28482_length_242_cov_3.260355_g27651_i0 PRJNA737474 28482 242 3.260355 7.8900591 Saccoglossus kowalevskii 10224 Hemichordata other_Eukaryota 67.6 7.78e-7   NTclustered gi|585669565|ref|XM_006817639.1| 10224 g27651 i0 95.238 0.524793388429752 42 2 17 0 134 175 1282 1241 PREDICTED: Saccoglossus kowalevskii propionyl-CoA carboxylase beta chain, mitochondrial-like (LOC100375821), mRNA blastn 127 67.6 1 Eukaryota Opisthokonta Metazoa Hemichordata Enteropneusta   Harrimaniidae Saccoglossus Saccoglossus kowalevskii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;