RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA737474" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA737474 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25705855 25705855 PRJNA737474b_S_NODE_44370_length_246_cov_1.895954_g43331_i0 PRJNA737474 44370 246 1.895954 4.66404684 Trypanosomatidae sp. 1737640 Euglenozoa other_Eukaryota 73.1 1.71e-8   NTclustered gi|2022380704|gb|MW874581.1| 1737640 g43331 i0 93.75 0.349593495934959 48 3 20 0 144 191 997 1044 Trypanosomatidae sp. isolate DN1120 large subunit ribosomal RNA gene, partial sequence blastn 86 73.1 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae   Trypanosomatidae sp.
25716539 25716539 PRJNA737474f_S_NODE_46386_length_347_cov_11.861314_g45708_i0 PRJNA737474 46386 347 11.861314 41.15875958 Trypanosoma cruzi cruzi 85057 Euglenozoa other_Eukaryota 56.5 0.003   NTclustered gi|1031970218|gb|CP015652.1| 85057 g45708 i0 92.5 0.657060518731988 40 1 11 2 171 209 393161 393123 Trypanosoma cruzi cruzi strain Sylvio X10/cl1 chromosome TcI2, partial sequence blastn 228 56.5 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
25721640 25721640 PRJNA737474g_S_NODE_260778_length_261_cov_2.079787_g259484_i0 PRJNA737474 260778 261 2.079787 5.42824407 Dimastigella trypaniformis 35226 Euglenozoa other_Eukaryota 187 6.2499999999999984e-43   NTclustered gi|25986820|gb|AY122624.1| 35226 g259484 i0 82.273 83.4827586206897 220 35 84 4 40 257 1080 863 Dimastigella trypaniformis strain Ulm heat shock protein 90 (HSP-90) gene, partial cds blastn 21789 187 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida Rhynchomonadidae Dimastigella Dimastigella trypaniformis
26123516 26123516 PRJNA737474f_S_NODE_262685_length_243_cov_2.976471_g262007_i0 PRJNA737474 262685 243 2.976471 7.23282453 Entosiphon sulcatum 101493 Euglenozoa other_Eukaryota 219 2.0399999999999998e-52   NTclustered gi|5733381|gb|AF095840.1|AF095840 101493 g262007 i0 84.615 84.3415637860082 221 32 91 2 15 234 817 598 Entosiphon sulcatum b-tubulin (tub-b) gene, complete cds blastn 20495 219 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sulcatum
26248185 26248185 PRJNA737474b_S_NODE_11062_length_485_cov_1.844660_g10027_i0 PRJNA737474 11062 485 1.84466 8.946601 Leptomonas pyrrhocoris 157538 Euglenozoa other_Eukaryota 60.2 2.83e-4   NTclustered gi|1002462697|ref|XM_015797227.1| 157538 g10027 i0 92.857 0.0865979381443299 42 1 8 2 381 421 6699 6659 Leptomonas pyrrhocoris hypothetical protein mRNA blastn 42 60.2 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leptomonas Leptomonas pyrrhocoris
26264721 26264721 PRJNA737474g_S_NODE_19742_length_683_cov_3.560656_g18539_i0 PRJNA737474 19742 683 3.560656 24.31928048 Trypanosoma cruzi cruzi 85057 Euglenozoa other_Eukaryota 56.5 0.005   NTclustered gi|1031970218|gb|CP015652.1| 85057 g18539 i0 92.5 0.0585651537335286 40 1 6 2 169 207 393123 393161 Trypanosoma cruzi cruzi strain Sylvio X10/cl1 chromosome TcI2, partial sequence blastn 40 56.5 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi
26534652 26534652 PRJNA737474g_S_NODE_107776_length_321_cov_2.233871_g106482_i0 PRJNA737474 107776 321 2.233871 7.17072591 Trypanosoma melophagium 715481 Euglenozoa other_Eukaryota 52.8 0.03   NTclustered gi|2787701305|ref|XM_067330257.1| 715481 g106482 i0 100 0.0872274143302181 28 0 9 0 273 300 1065 1038 Trypanosoma melophagium uncharacterized protein (LSM04_006945), partial mRNA blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma melophagium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;