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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA737474" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA737474 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25572757 25572757 PRJNA737474d_S_NODE_18265_length_358_cov_6.635088_g17671_i0 PRJNA737474 18265 358 6.635088 23.75361504 Asterias rubens 7604 Echinodermata other_Eukaryota 56.5 0.003   NTclustered gi|1834276388|ref|XM_033785549.1| 7604 g17671 i0 100 0.162011173184358 30 0 8 0 78 107 684 655 PREDICTED: Asterias rubens 39S ribosomal protein L17, mitochondrial-like (LOC117301528), mRNA blastn 58 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Forcipulatida Asteriidae Asterias Asterias rubens
25630712 25630712 PRJNA737474g_S_NODE_254625_length_263_cov_0.921053_g253331_i0 PRJNA737474 254625 263 0.921053 2.42236939 Metazoa 33208 Echinodermata other_Eukaryota 54.7 0.007   NTclustered gi|70887808|gb|AC165428.1| 7668 g253331 i0 94.444 1.34980988593156 36 0 13 1 58 91 481019 481054 Strongylocentrotus purpuratus BAC clone contig containing Eve, the hox cluster, cholinesterase, and COLP5alpha genes, complete sequence blastn 355 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
25843275 25843275 PRJNA737474c_S_NODE_20211_length_273_cov_2.135000_g19380_i0 PRJNA737474 20211 273 2.135 5.82855 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 135 2.4199999999999998e-27   NTclustered gi|1752383405|ref|XM_030994818.1| 7668 g19380 i0 93.407 37.6959706959707 91 6 33 0 18 108 1242 1332 PREDICTED: Strongylocentrotus purpuratus tubulin alpha-1 chain-like (LOC115918924), mRNA blastn 10291 135 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
25852017 25852017 PRJNA737474f_S_NODE_33403_length_382_cov_1.841424_g32725_i0 PRJNA737474 33403 382 1.841424 7.03423968 Patiria miniata 46514 Echinodermata other_Eukaryota 97.1 1.66e-15   NTclustered gi|1944895271|ref|XM_038206158.1| 46514 g32725 i0 85.106 1 94 14 25 0 248 341 1765 1672 PREDICTED: Patiria miniata fumarate hydratase class I, aerobic-like (LOC119732588), mRNA blastn 382 97.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata
25901743 25901743 PRJNA737474f_S_NODE_68139_length_316_cov_2.189300_g67461_i0 PRJNA737474 68139 316 2.1893 6.918188 Metazoa 33208 Echinodermata other_Eukaryota 56.5 0.002   NTclustered gi|1752400020|ref|XM_011669709.2| 7668 g67461 i0 96.97 2.20253164556962 33 1 10 0 46 78 2025 1993 PREDICTED: Strongylocentrotus purpuratus fibrous sheath CABYR-binding protein (LOC763199), transcript variant X1, mRNA blastn 696 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
26174784 26174784 PRJNA737474g_S_NODE_156677_length_293_cov_3.168182_g155383_i0 PRJNA737474 156677 293 3.168182 9.28277326 Lytechinus 7652 Echinodermata other_Eukaryota 52.8 0.027   NTclustered gi|2707422408|ref|XM_054902275.2| 7653 g155383 i0 100 0.191126279863481 28 0 10 0 146 173 3089 3062 PREDICTED: Lytechinus pictus homeobox protein goosecoid-like (LOC129264401), mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
26403092 26403092 PRJNA737474g_S_NODE_34103_length_489_cov_3.639423_g32816_i0 PRJNA737474 34103 489 3.639423 17.79677847 Patiria miniata 46514 Echinodermata other_Eukaryota 97.1 2.17e-15   NTclustered gi|1944895271|ref|XM_038206158.1| 46514 g32816 i0 85.106 0.78118609406953 94 14 19 0 28 121 1672 1765 PREDICTED: Patiria miniata fumarate hydratase class I, aerobic-like (LOC119732588), mRNA blastn 382 97.1 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Asterinidae Patiria Patiria miniata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;