RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA737474" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 3 ✖

bioproject 1

  • PRJNA737474 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25572158 25572158 PRJNA737474c_S_NODE_7601_length_395_cov_5.593168_g6770_i0 PRJNA737474 7601 395 5.593168 22.0930136 Halovalidus salilacus 3075124 Archaea Archaea 52.8 0.038   NTclustered gi|2581323319|gb|CP134700.1| 3075124 g6770 i0 100 0.0708860759493671 28 0 7 0 59 86 1617456 1617483 Halovalidus salilacus strain CCL63 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Halovalidus Halovalidus salilacus
25714414 25714414 PRJNA737474f_S_NODE_193826_length_252_cov_1.720670_g193148_i0 PRJNA737474 193826 252 1.72067 4.3360884 Methanolobus sp. ZRKC3 3125786 Archaea Archaea 52.8 0.023   NTclustered gi|2708465663|gb|CP146982.1| 3125786 g193148 i0 100 0.111111111111111 28 0 11 0 221 248 1563628 1563655 Methanolobus sp. ZRKC3 chromosome, complete genome blastn 28 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus Methanolobus sp. ZRKC3
26401200 26401200 PRJNA737474g_S_NODE_228479_length_269_cov_1.663265_g227185_i0 PRJNA737474 228479 269 1.663265 4.47418285 Halosimplex pelagicum 869886 Archaea Archaea 60.2 1.47e-4   NTclustered gi|1870066477|gb|CP058909.1| 869886 g227185 i0 97.143 0.130111524163569 35 1 13 0 235 269 2160277 2160243 Halosimplex pelagicum strain R2 chromosome, complete genome blastn 35 60.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halosimplex Halosimplex pelagicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;