RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA737474" and tax_clade = "Metamonada"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 8 ✖

bioproject 1

  • PRJNA737474 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25583473 25583473 PRJNA737474g_S_NODE_159865_length_292_cov_1.200913_g158571_i0 PRJNA737474 159865 292 1.200913 3.50666596 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.008   NTclustered gi|2794974031|ref|XM_067862771.1| 2049356 g158571 i0 100 0.205479452054795 29 0 10 0 242 270 8777 8749 Monocercomonoides exilis putative guanylate kinase (MONOS_10329), partial mRNA blastn 60 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
25703829 25703829 PRJNA737474b_S_NODE_13650_length_433_cov_3.638889_g12613_i0 PRJNA737474 13650 433 3.638889 15.75638937 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 65.8 5.37e-6   NTclustered gi|2794958597|ref|XM_067868078.1| 2049356 g12613 i0 97.436 7.62586605080831 39 0 9 1 278 316 1165 1202 Monocercomonoides exilis putative ubiquitin carboxyl-terminal hydrolase isozyme L5 (MONOS_15213), mRNA blastn 3302 65.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
25851978 25851978 PRJNA737474f_S_NODE_328283_length_226_cov_2.045752_g327605_i0 PRJNA737474 328283 226 2.045752 4.62339952 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 54.7 0.006   NTclustered gi|2794977093|ref|XM_067872470.1| 2049356 g327605 i0 100 0.256637168141593 29 0 13 0 102 130 955 983 Monocercomonoides exilis dynein haevy chain (MONOS_2545), partial mRNA blastn 58 54.7 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
26116839 26116839 PRJNA737474d_S_NODE_12829_length_430_cov_3.103641_g12238_i0 PRJNA737474 12829 430 3.103641 13.3456563 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 62.1 6.89e-5   NTclustered gi|2794976600|ref|XM_067873006.1| 2049356 g12238 i0 97.222 0.158139534883721 36 1 8 0 156 191 1669 1704 Monocercomonoides exilis putative Casein kinase I (MONOS_3036), mRNA blastn 68 62.1 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
26124547 26124547 PRJNA737474f_S_NODE_39973_length_362_cov_2.480969_g39295_i0 PRJNA737474 39973 362 2.480969 8.98110778 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.034   NTclustered gi|2794968045|ref|XM_067879236.1| 2049356 g39295 i0 100 0.0773480662983425 28 0 8 0 285 312 3991 4018 Monocercomonoides exilis putative piezo-type mechanosensitive ion channel component 1/2 (MONOS_8797), mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
26250020 26250020 PRJNA737474b_S_NODE_38462_length_262_cov_1.767196_g37423_i0 PRJNA737474 38462 262 1.767196 4.63005352 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 54.7 0.007   NTclustered gi|2794903809|ref|XM_067913872.1| 135588 g37423 i0 100 0.587786259541985 29 0 12 0 54 82 1016 988 Histomonas meleagridis uncharacterized protein (GO595_011117), partial mRNA blastn 154 54.7 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
26402895 26402895 PRJNA737474g_S_NODE_32431_length_502_cov_10354.335664_g31148_i0 PRJNA737474 32431 502 10354.335664 51978.76503328 Paratrimastix eleionoma 1709329 Preaxostyla other_Eukaryota 148 6.079999999999999e-31   NTclustered gi|2443275925|gb|OP718911.1| 1709329 g31148 i0 90.909 17.2709163346614 110 10 22 0 3 112 307 416 Paratrimastix eleionoma 60S ribosomal protein L11 mRNA, complete cds blastn 8670 148 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix eleionoma
26532597 26532597 PRJNA737474f_S_NODE_37400_length_369_cov_2.726351_g36722_i0 PRJNA737474 37400 369 2.726351 10.06023519 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.035   NTclustered gi|2794958174|ref|XM_067875893.1| 2049356 g36722 i0 100 0.0758807588075881 28 0 8 0 295 322 3448 3475 Monocercomonoides exilis uncharacterized protein (MONOS_571fu572), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;