RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA737474" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA737474 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25584756 25584756 PRJNA737474g_S_NODE_217593_length_272_cov_1.773869_g216299_i0 PRJNA737474 217593 272 1.773869 4.82492368 Candidatus Saccharibacteria bacterium RAAC3_TM7_1 1394711 Bacteria Bacteria 217 8.359999999999999e-52   NTclustered gi|563353835|gb|CP006915.1| 1394711 g216299 i0 82.917 3.84558823529412 240 41 88 0 9 248 443783 443544 Candidatus Saccharibacteria bacterium RAAC3_TM7_1, complete genome blastn 1046 217 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium RAAC3_TM7_1
26128766 26128766 PRJNA737474g_S_NODE_201389_length_277_cov_1.411765_g200095_i0 PRJNA737474 201389 277 1.411765 3.91058905 Candidatus Saccharibacteria bacterium 2026720 Bacteria Bacteria 65.8 3.27e-6   NTclustered gi|1950821269|gb|CP066696.1| 2026720 g200095 i0 84.848 0.516245487364621 66 8 23 2 54 118 692781 692845 Candidatus Saccharibacteria bacterium isolate NC_groundwater_1927_Pr3_S-0.2um_48_6 chromosome blastn 143 65.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
26398103 26398103 PRJNA737474f_S_NODE_91943_length_296_cov_2.668161_g91265_i0 PRJNA737474 91943 296 2.668161 7.89775656 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 58.4 5.91e-4   NTclustered gi|2108435138|gb|CP070627.1| 2052149 g91265 i0 100 3.91891891891892 31 0 13 0 257 287 5816485 5816515 MAG: Candidatus Aminicenantes bacterium isolate bin99 chromosome blastn 1160 58.4 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;