RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA734348" and tax_phylum = "Preplasmiviricota"

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tax_superkingdom 1

tax_phylum 1

  • Preplasmiviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA734348 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3748499 3748499 PRJNA734348_P_NODE_103003_length_248_cov_1.560000_g102305_i0 PRJNA734348 103003 248 1.56 3.8688 root 1 Root_unresolved Root_unresolved 444 3.17e-120   NTclustered gi|2288721861|gb|OP218818.1| 10535 g102305 i0 98.805 101.959677419355 251 0 100 1 1 248 2072 2322 Unidentified adenovirus strain CHOP Ad5 blastn 25286 444 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
13950924 13950924 PRJNA734348_P_NODE_148451_length_204_cov_11.122137_g147753_i0 PRJNA734348 148451 204 11.122137 22.68915948 root 1 Root_unresolved Root_unresolved 267 5.839999999999999e-67   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g147753 i0 100 70.5882352941177 144 0 71 0 56 199 11236 11379 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 14400 267 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
22874456 22874456 PRJNA734348_P_NODE_148938_length_202_cov_15.945736_g148240_i0 PRJNA734348 148938 202 15.945736 32.21038672 root 1 Root_unresolved Root_unresolved 267 5.77e-67   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g148240 i0 99.324 73.2673267326733 148 0 73 1 1 147 11550 11403 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 14800 267 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;