RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA734348" and tax_phylum = "Mucoromycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA734348 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7095416 7095416 PRJNA734348_P_NODE_100666_length_249_cov_0.875000_g99968_i0 PRJNA734348 100666 249 0.875 2.17875 Gamsiella multidivaricata 101098 Fungi Fungi 350 7.14e-92   NTclustered gi|2323791821|ref|XM_051552495.1| 101098 g99968 i0 91.968 35.0562248995984 249 20 100 0 1 249 909 1157 Gamsiella multidivaricata P-loop containing nucleoside triphosphate hydrolase protein (BC939DRAFT_399698), partial mRNA blastn 8729 350 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
8371067 8371067 PRJNA734348_P_NODE_21687_length_427_cov_2.076271_g20995_i0 PRJNA734348 21687 427 2.076271 8.86567717 Phycomyces blakesleeanus 4837 Fungi Fungi 228 6.3699999999999976e-55   NTclustered gi|1069936519|ref|XM_018440025.1| 763407 g20995 i0 82.014 58.5620608899297 278 41 64 6 153 427 135 406 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein mRNA blastn 25006 228 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
9646917 9646917 PRJNA734348_P_NODE_53408_length_286_cov_2.107981_g52711_i0 PRJNA734348 53408 286 2.107981 6.02882566 Rhizopus delemar 936053 Fungi Fungi 220 6.85e-53   NTclustered gi|2797464001|ref|XM_067662606.1| 246409 g52711 i0 80.851 0.986013986013986 282 52 98 2 3 283 175 455 Rhizopus delemar RA 99-880 uncharacterized protein (RO3G_08016), partial mRNA blastn 282 220 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus delemar
13951386 13951386 PRJNA734348_P_NODE_72631_length_267_cov_1.634021_g71933_i0 PRJNA734348 72631 267 1.634021 4.36283607 Fungi 4751 Fungi Fungi 298 2.84e-76   NTclustered gi|2797407813|ref|XM_067655599.1| 246409 g71933 i0 90.625 55.5468164794007 224 21 84 0 1 224 392 615 Rhizopus delemar RA 99-880 adenosylhomocysteinase (RO3G_01008), partial mRNA blastn 14831 298 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus delemar
15226074 15226074 PRJNA734348_P_NODE_83332_length_257_cov_31.336957_g82634_i0 PRJNA734348 83332 257 31.336957 80.53597949 Fungi 4751 Fungi Fungi 470 5.45e-128   NTclustered gi|359392757|gb|JN689349.1| 13706 g82634 i0 100 98.8326848249027 254 0 99 0 1 254 427 174 Syncephalastrum racemosum 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 25400 470 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Syncephalastraceae Syncephalastrum Syncephalastrum racemosum
17297242 17297242 PRJNA734348_P_NODE_92454_length_251_cov_0.865169_g91756_i0 PRJNA734348 92454 251 0.865169 2.17157419 Calcarisporiella thermophila 911321 Fungi Fungi 320 5.65e-83   NTclustered gi|2837879392|ref|XM_069398379.1| 911321 g91756 i0 89.96 11.7569721115538 249 24 99 1 3 251 1238 991 Calcarisporiella thermophila uncharacterized protein (VTP21DRAFT_7618), partial mRNA blastn 2951 320 1 Eukaryota Opisthokonta Fungi Mucoromycota   Calcarisporiellales Calcarisporiellaceae Calcarisporiella Calcarisporiella thermophila
22396111 22396111 PRJNA734348_P_NODE_65138_length_274_cov_2.298507_g64441_i0 PRJNA734348 65138 274 2.298507 6.29790918 Diversispora versiformis 1963269 Fungi Fungi 108 5.3e-19   NTclustered gi|56791308|gb|AY842573.1| 1963269 g64441 i0 86.735 7.04744525547445 98 11 35 2 161 257 272 368 Glomus versiforme clone LSU1 large subunit ribosomal RNA gene, partial sequence blastn 1931 108 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Diversisporaceae Diversispora Diversispora versiformis

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;