RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA734348" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA734348 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7096021 7096021 PRJNA734348_P_NODE_134566_length_240_cov_3.868263_g133868_i0 PRJNA734348 134566 240 3.868263 9.2838312 Ripastyr virus 3131364 Viruses Viruses 435 1.83e-117   NTclustered gi|2717322326|gb|PP173666.1| 3131364 g133868 i0 99.58 1071.22916666667 238 1 99 0 1 238 289 526 MAG: Ripastyr virus isolate MP3_k141_6580 genomic sequence blastn 257095 435 1 Viruses   Orthornavirae Lenarviricota Leviviricetes       Ripastyr virus
23670375 23670375 PRJNA734348_P_NODE_134159_length_241_cov_0.916667_g133461_i0 PRJNA734348 134159 241 0.916667 2.20916747 Betascleroulivirus thetaplasmoparae 2955488 Viruses Viruses 265 2.5599999999999996e-66   NTclustered gi|2500381320|ref|NC_076772.1| 2686512 g133461 i0 86.611 2.74273858921162 239 32 99 0 1 239 1082 844 Plasmopara viticola lesion associated ourmia-like virus 42 isolate DMG-G_38207 RNA dependent RNA polymerase (QKR47_gp1) gene, complete cds blastn 661 265 1 Viruses   Orthornavirae Lenarviricota Miaviricetes Ourlivirales Botourmiaviridae Betascleroulivirus Betascleroulivirus thetaplasmoparae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;