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contig_metadata

16 rows where analysis = "blastn", bioproject = "PRJNA734348" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 16 ✖

tax_clade 1

bioproject 1

  • PRJNA734348 · 16 ✖

analysis 1

  • blastn · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
717970 717970 PRJNA734348_P_NODE_28601_length_364_cov_1.635739_g27906_i0 PRJNA734348 28601 364 1.635739 5.95408996 Heterolobosea sp. 1892890 Heterolobosea other_Eukaryota 497 3.69e-136   NTclustered gi|1059971677|gb|KT892699.1| 1892890 g27906 i0 91.257 23.7115384615385 366 30 100 2 1 364 1391 1756 Heterolobosea sp. strain LPG3 18S ribosomal RNA gene, partial sequence blastn 8631 497 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp.
1994260 1994260 PRJNA734348_P_NODE_42922_length_307_cov_1.974359_g42225_i0 PRJNA734348 42922 307 1.974359 6.06128213 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 141 5.94e-29   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g42225 i0 87.603 38.1889250814332 121 15 39 0 17 137 4251 4131 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11724 141 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
3749024 3749024 PRJNA734348_P_NODE_46003_length_297_cov_2.607143_g45306_i0 PRJNA734348 46003 297 2.607143 7.74321471 Paravahlkampfia 166957 Heterolobosea other_Eukaryota 542 1.34e-149   NTclustered gi|1121487417|gb|KX068999.1| 166958 g45306 i0 99.662 46.6228956228956 296 1 99 0 1 296 365 70 Paravahlkampfia ustiana strain ST-39 18S ribosomal RNA gene, partial sequence blastn 13847 547 0.990859232175503 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Paravahlkampfia Paravahlkampfia ustiana
4546185 4546185 PRJNA734348_P_NODE_19104_length_465_cov_3.321429_g18414_i0 PRJNA734348 19104 465 3.321429 15.44464485 Vahlkampfiidae sp. SG-2014 1445705 Heterolobosea other_Eukaryota 832 0   NTclustered gi|574484041|gb|KF547920.1| 1445705 g18414 i0 98.925 27.2731182795699 465 5 100 0 1 465 581 1045 Vahlkampfiidae sp. SG-2014 18S ribosomal RNA gene, partial sequence blastn 12682 832 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae   Vahlkampfiidae sp. SG-2014
4546434 4546434 PRJNA734348_P_NODE_30164_length_354_cov_1.644128_g29468_i0 PRJNA734348 30164 354 1.644128 5.82021312 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 294 5.04e-75   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g29468 i0 89.167 53.7118644067797 240 21 67 5 116 352 2901 3138 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 19014 294 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
5025320 5025320 PRJNA734348_P_NODE_19004_length_467_cov_1.477157_g18314_i0 PRJNA734348 19004 467 1.477157 6.89832319 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 774 0   NTclustered gi|407750695|gb|JX441981.1| 1237086 g18314 i0 96.574 84.3768736616702 467 16 100 0 1 467 1359 893 Heterolobosea sp. HGG1 18S ribosomal RNA gene, partial sequence blastn 39404 780 0.992307692307692 Eukaryota Discoba   Heterolobosea         Heterolobosea sp. HGG1
7096424 7096424 PRJNA734348_P_NODE_20086_length_449_cov_1.340426_g19395_i0 PRJNA734348 20086 449 1.340426 6.01851274 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 754 0   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g19395 i0 97.092 23.6458797327394 447 13 99 0 3 449 2044 2490 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 10617 754 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
10922321 10922321 PRJNA734348_P_NODE_49509_length_290_cov_2.299539_g48812_i0 PRJNA734348 49509 290 2.2995390000000002 6.6686631 Vrihiamoeba italica 660567 Heterolobosea other_Eukaryota 189 1.9599999999999993e-43   NTclustered gi|254587474|dbj|AB513361.1| 660567 g48812 i0 87.059 0.586206896551724 170 19 58 3 122 289 444 276 Vrihiamoeba italica genes for ITS1, 5.8S rRNA, ITS2, partial and complete sequence blastn 170 189 1 Eukaryota Discoba   Heterolobosea     Gruberellidae Vrihiamoeba Vrihiamoeba italica
10922957 10922957 PRJNA734348_P_NODE_85629_length_256_cov_1.163934_g84931_i0 PRJNA734348 85629 256 1.163934 2.97967104 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 84.2 8.25e-12   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g84931 i0 92.982 0.66796875 57 4 22 0 27 83 3299 3243 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 171 84.2 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
12676560 12676560 PRJNA734348_P_NODE_139430_length_233_cov_2.637500_g138732_i0 PRJNA734348 139430 233 2.6375 6.145375 Tetramitus 5768 Heterolobosea other_Eukaryota 431 2.2899999999999996e-116   NTclustered gi|4469330|emb|AJ224888.1| 74084 g138732 i0 100 22.9227467811159 233 0 100 0 1 233 144 376 Vahlkampfia aberdonica SSU rRNA gene, strain CCAP 1588/4 blastn 5341 431 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Tetramitus Tetramitus aberdonicus
13471230 13471230 PRJNA734348_P_NODE_139691_length_232_cov_5.433962_g138993_i0 PRJNA734348 139691 232 5.433962 12.60679184 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 82.4 2.65e-11   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g138993 i0 87.324 274.616379310345 71 9 31 0 4 74 4506 4436 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 63711 82.4 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
15226117 15226117 PRJNA734348_P_NODE_89532_length_252_cov_3.106145_g88834_i0 PRJNA734348 89532 252 3.106145 7.8274854 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 464 2.4799999999999998e-126   NTclustered gi|399764157|gb|JQ271668.1| 1217110 g88834 i0 100 91.0079365079365 251 0 99 0 2 252 2012 1762 Allovahlkampfia sp. PKD 2011a strain 4165 18S ribosomal RNA gene, partial sequence blastn 22934 464 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. PKD 2011a
17774936 17774936 PRJNA734348_P_NODE_30454_length_352_cov_2.175627_g29758_i0 PRJNA734348 30454 352 2.175627 7.65820704 Tetramitus 5768 Heterolobosea other_Eukaryota 651 0   NTclustered gi|961350039|gb|KT290032.1| 166960 g29758 i0 100 96.4886363636364 352 0 100 0 1 352 548 197 Tetramitus thorntoni 18S ribosomal RNA gene, partial sequence blastn 33964 651 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Tetramitus Tetramitus thorntoni
22396267 22396267 PRJNA734348_P_NODE_75018_length_265_cov_1.468750_g74320_i0 PRJNA734348 75018 265 1.46875 3.8921875 Acrasis rosea 43695 Heterolobosea other_Eukaryota 479 9.38e-131   NTclustered gi|2874368074|gb|PQ819798.1| 43695 g74320 i0 99.245 96.3283018867925 265 2 100 0 1 265 1169 1433 Acrasis rosea strain NJ08-1 small subunit ribosomal RNA gene, partial sequence blastn 25527 479 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis rosea
23670782 23670782 PRJNA734348_P_NODE_19579_length_457_cov_2.388021_g18889_i0 PRJNA734348 19579 457 2.388021 10.91325597 Naegleria fowleri 5763 Heterolobosea other_Eukaryota 87.9 1.22e-12   NTclustered gi|2579156136|gb|OR459835.1| 5763 g18889 i0 85.714 3.55361050328228 84 11 18 1 4 87 2263 2181 Naegleria fowleri isolate TW mitochondrion, complete genome blastn 1624 87.9 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
24148735 24148735 PRJNA734348_P_NODE_24999_length_391_cov_5.408805_g24304_i0 PRJNA734348 24999 391 5.408805 21.14842755 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 593 4.949999999999998e-165   NTclustered gi|89148133|gb|DQ388519.1| 373143 g24304 i0 94.118 40.0306905370844 391 22 99 1 2 391 2080 2470 Heterolobosea sp. BA 16S small subunit ribosomal RNA gene, partial sequence; and His-Cys box homing endonuclease gene, complete cds blastn 15652 593 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp. BA

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;