contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA734348" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4545900 | 4545900 | PRJNA734348_P_NODE_139984_length_232_cov_2.855346_g139286_i0 | PRJNA734348 | 139984 | 232 | 2.855346 | 6.62440272 | Bdellovibrio sp. HCB-162 | 3394234 | Bacteria | Bacteria | 237 | 5.34e-58 | NTclustered | gi|2898207634|gb|CP178861.1| | 3394234 | g139286 | i0 | 86.301 | 14.0387931034483 | 219 | 28 | 94 | 2 | 3 | 220 | 1477375 | 1477592 | Bdellovibrio sp. HCB-162 chromosome, complete genome | blastn | 3257 | 237 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HCB-162 | ||
| 4546555 | 4546555 | PRJNA734348_P_NODE_35984_length_325_cov_2.138889_g35288_i0 | PRJNA734348 | 35984 | 325 | 2.138889 | 6.95138925 | Bacteriovoracaceae bacterium | 2081706 | Bacteria | Bacteria | 196 | 1.33e-45 | NTclustered | gi|2907625691|emb|OZ223251.1| | 2081706 | g35288 | i0 | 82.96 | 2.29230769230769 | 223 | 32 | 68 | 5 | 16 | 235 | 90929 | 90710 | MAG: Bacteriovoracaceae bacterium isolate 56684ba0-df17-47c9-bcf5-ee076427a4fa genome assembly, chromosome: 1 | blastn | 745 | 196 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovoracaceae bacterium | |||
| 6301619 | 6301619 | PRJNA734348_P_NODE_89845_length_252_cov_2.184358_g89147_i0 | PRJNA734348 | 89845 | 252 | 2.184358 | 5.50458216 | Pseudobdellovibrio | 2862745 | Bacteria | Bacteria | 366 | 7.19e-97 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g89147 | i0 | 92.857 | 150.535714285714 | 252 | 18 | 100 | 0 | 1 | 252 | 309 | 58 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 37935 | 366 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 7095512 | 7095512 | PRJNA734348_P_NODE_106246_length_247_cov_2.385057_g105548_i0 | PRJNA734348 | 106246 | 247 | 2.385057 | 5.89109079 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 198 | 2.71e-46 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g105548 | i0 | 82.174 | 0.931174089068826 | 230 | 41 | 93 | 0 | 1 | 230 | 3020853 | 3021082 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 230 | 198 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 8370894 | 8370894 | PRJNA734348_P_NODE_150327_length_197_cov_6.338710_g149629_i0 | PRJNA734348 | 150327 | 197 | 6.33871 | 12.4872587 | Bdellovibrio sp. HAGR004 | 3113895 | Bacteria | Bacteria | 224 | 3.419999999999999e-54 | NTclustered | gi|2663432256|dbj|AP029176.1| | 3113895 | g149629 | i0 | 87.629 | 0.984771573604061 | 194 | 22 | 98 | 2 | 4 | 196 | 1628326 | 1628134 | Bdellovibrio sp. HAGR004 DNA, complete genome | blastn | 194 | 224 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio sp. HAGR004 | ||
| 9646155 | 9646155 | PRJNA734348_P_NODE_18388_length_477_cov_5.200495_g17698_i0 | PRJNA734348 | 18388 | 477 | 5.200495 | 24.80636115 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 525 | 2.2799999999999993e-144 | NTclustered | gi|2556916994|gb|CP129486.1| | 3034175 | g17698 | i0 | 87.257 | 169.218029350105 | 463 | 56 | 97 | 3 | 14 | 474 | 468673 | 469134 | MAG: Bdellovibrionota bacterium isolate cMAG.10 chromosome, complete genome | blastn | 80717 | 525 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 12677223 | 12677223 | PRJNA734348_P_NODE_9950_length_748_cov_2.942222_g9330_i0 | PRJNA734348 | 9950 | 748 | 2.942222 | 22.00782056 | Peredibacter | 263370 | Bacteria | Bacteria | 1330 | 0 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g9330 | i0 | 98.795 | 139.331550802139 | 747 | 9 | 99 | 0 | 2 | 748 | 510761 | 511507 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 104220 | 1330 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 15226040 | 15226040 | PRJNA734348_P_NODE_77232_length_263_cov_1.526316_g76534_i0 | PRJNA734348 | 77232 | 263 | 1.526316 | 4.01421108 | Bacteriovorax | 146784 | Bacteria | Bacteria | 398 | 2.6799999999999995e-106 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g76534 | i0 | 93.916 | 3 | 263 | 16 | 100 | 0 | 1 | 263 | 3564996 | 3564734 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 789 | 401 | 0.992518703241895 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 16020550 | 16020550 | PRJNA734348_P_NODE_29433_length_358_cov_3.933333_g28737_i0 | PRJNA734348 | 29433 | 358 | 3.933333 | 14.08133214 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 641 | 1.5799999999999994e-179 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g28737 | i0 | 98.889 | 192.513966480447 | 360 | 2 | 100 | 1 | 1 | 358 | 511798 | 512157 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 68920 | 641 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 17295931 | 17295931 | PRJNA734348_P_NODE_24634_length_395_cov_1.732919_g23939_i0 | PRJNA734348 | 24634 | 395 | 1.732919 | 6.84503005 | Peredibacter sp. HCB2-198 | 3383025 | Bacteria | Bacteria | 235 | 3.5e-57 | NTclustered | gi|2867657404|gb|CP174607.1| | 3383025 | g23939 | i0 | 78.515 | 177.448101265823 | 377 | 67 | 94 | 13 | 1 | 372 | 1292934 | 1293301 | Peredibacter sp. HCB2-198 chromosome, complete genome | blastn | 70092 | 235 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter sp. HCB2-198 | ||
| 19048905 | 19048905 | PRJNA734348_P_NODE_26275_length_380_cov_6.260586_g25580_i0 | PRJNA734348 | 26275 | 380 | 6.260586 | 23.7902268 | Peredibacter | 263370 | Bacteria | Bacteria | 641 | 1.69e-179 | NTclustered | gi|2631252187|gb|CP139487.1| | 28202 | g25580 | i0 | 97.105 | 149.884210526316 | 380 | 11 | 100 | 0 | 1 | 380 | 512610 | 512231 | Peredibacter starrii strain A3.12 chromosome, complete genome | blastn | 56956 | 641 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 25423796 | 25423796 | PRJNA734348_P_NODE_29860_length_356_cov_1.618375_g29164_i0 | PRJNA734348 | 29860 | 356 | 1.618375 | 5.761415 | Bdellovibrio | 958 | Bacteria | Bacteria | 263 | 1.43e-65 | NTclustered | gi|2800924434|gb|CP168967.1| | 959 | g29164 | i0 | 81.176 | 29.0224719101124 | 340 | 53 | 94 | 11 | 19 | 353 | 784625 | 784292 | Bdellovibrio bacteriovorus strain Bd4 chromosome, complete genome | blastn | 10332 | 263 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;