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contig_metadata

27 rows where analysis = "blastn", bioproject = "PRJNA734313" and tax_phylum = "Streptophyta"

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tax_superkingdom 1

tax_phylum 1

  • Streptophyta · 27 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA734313 · 27 ✖

analysis 1

  • blastn · 27 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
716696 716696 PRJNA734313_S_NODE_18501_length_217_cov_2.700000_g18388_i0 PRJNA734313 18501 217 2.7 5.859 Anacolia laevisphaera 188169 Plants Plants 56.5 0.001   NTclustered gi|548954658|emb|HF536620.1| 188169 g18388 i0 100 3.2258064516129 30 0 14 0 75 104 686 657 Anacolia laevisphaera chloroplast trnS-trnF region, isolate Murcia-994 blastn 700 56.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Bartramiales Bartramiaceae Anacolia Anacolia laevisphaera
716711 716711 PRJNA734313_S_NODE_3661_length_436_cov_10.195373_g3553_i0 PRJNA734313 3661 436 10.195373 44.45182628 Malus domestica 3750 Plants Plants 58.4 0.001   NTclustered gi|2810943376|gb|CP168774.1| 3750 g3553 i0 97.059 0.0779816513761468 34 1 8 0 386 419 7388809 7388776 Malus domestica cultivar Golden Delicious chromosome 10 blastn 34 58.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Rosaceae Malus Malus domestica
1196720 1196720 PRJNA734313_S_NODE_10361_length_291_cov_3.581967_g10248_i0 PRJNA734313 10361 291 3.581967 10.42352397 Brassica 3705 Plants Plants 60.2 1.61e-4   NTclustered gi|2258341992|ref|XM_013833021.3| 3708 g10248 i0 100 4.553264604811 32 0 11 0 86 117 557 588 PREDICTED: Brassica napus phosphopantothenoylcysteine decarboxylase subunit VHS3 (LOC106392219), mRNA blastn 1325 60.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Brassica Brassica napus
2472116 2472116 PRJNA734313_S_NODE_20562_length_206_cov_0.962264_g20449_i0 PRJNA734313 20562 206 0.962264 1.98226384 Eukaryota 2759 Plants Plants 58.4 3.87e-4   NTclustered gi|2258318110|ref|XM_013822454.3| 3708 g20449 i0 97.059 2.20873786407767 34 1 17 0 132 165 1099 1132 PREDICTED: Brassica napus nucleosome assembly protein 1;2 (LOC106382434), transcript variant X2, mRNA blastn 455 58.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Brassica Brassica napus
4545187 4545187 PRJNA734313_S_NODE_17004_length_227_cov_1.505556_g16891_i0 PRJNA734313 17004 227 1.505556 3.41761212 Picea abies 3329 Plants Plants 56.5 0.002   NTclustered gi|2835530376|dbj|LC777199.1| 3329 g16891 i0 96.97 0.268722466960352 33 1 15 0 1 33 377 409 Picea abies Pa-Kumamoto-2022 PaDdl mRNA for D-alanine-D-alanine ligase, complete cds blastn 61 56.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Picea Picea abies
5820288 5820288 PRJNA734313_S_NODE_19845_length_209_cov_8.561728_g19732_i0 PRJNA734313 19845 209 8.561728 17.89401152 Zingiber officinale 94328 Plants Plants 60.2 1.1e-4   NTclustered gi|2070000340|ref|XR_006114785.1| 94328 g19732 i0 100 0.425837320574163 32 0 15 0 1 32 174 205 PREDICTED: Zingiber officinale uncharacterized LOC121991958 (LOC121991958), ncRNA blastn 89 60.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Zingiberales Zingiberaceae Zingiber Zingiber officinale
6300819 6300819 PRJNA734313_S_NODE_14085_length_251_cov_1.210784_g13972_i0 PRJNA734313 14085 251 1.210784 3.03906784 Eukaryota 2759 Plants Plants 52.8 0.023   NTclustered gi|1963662117|emb|LR861820.1| 4565 g13972 i0 100 0.350597609561753 28 0 11 0 1 28 6 33 Triticum aestivum mRNA for NB-LRR protein (Pm1 gene), cultivar Axminster, allele Pm1a blastn 88 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
7095388 7095388 PRJNA734313_S_NODE_26786_length_179_cov_1.159091_g26673_i0 PRJNA734313 26786 179 1.159091 2.07477289 Dendrobium officinale 142615 Plants Plants 56.5 0.001   NTclustered gi|855403370|gb|KP009862.1| 142615 g26673 i0 100 0.810055865921788 30 0 17 0 150 179 79 50 Dendrobium catenatum somatic embryogenesis receptor kinase protein (SERK) mRNA, complete cds blastn 145 56.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asparagales Orchidaceae Dendrobium Dendrobium officinale
7574679 7574679 PRJNA734313_S_NODE_1926_length_531_cov_6.960744_g1821_i0 PRJNA734313 1926 531 6.960744 36.96155064 Eukaryota 2759 Plants Plants 54.7 0.014   NTclustered gi|1963662117|emb|LR861820.1| 4565 g1821 i0 100 0.188323917137476 29 0 5 0 503 531 34 6 Triticum aestivum mRNA for NB-LRR protein (Pm1 gene), cultivar Axminster, allele Pm1a blastn 100 54.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
9645183 9645183 PRJNA734313_S_NODE_24668_length_187_cov_1.457143_g24555_i0 PRJNA734313 24668 187 1.457143 2.72485741 Eragrostis tef 110835 Plants Plants 228 2.4799999999999995e-55   NTclustered gi|2710185566|gb|CP137595.1| 110835 g24555 i0 90.23 0.93048128342246 174 17 93 0 14 187 22658282 22658109 Eragrostis tef cultivar Dabbi chromosome 7B blastn 174 228 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Eragrostis Eragrostis tef
11400467 11400467 PRJNA734313_S_NODE_21069_length_203_cov_1.602564_g20956_i0 PRJNA734313 21069 203 1.602564 3.25320492 Eukaryota 2759 Plants Plants 52.8 0.018   NTclustered gi|1963662117|emb|LR861820.1| 4565 g20956 i0 100 0.413793103448276 28 0 14 0 176 203 33 6 Triticum aestivum mRNA for NB-LRR protein (Pm1 gene), cultivar Axminster, allele Pm1a blastn 84 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
11400468 11400468 PRJNA734313_S_NODE_21329_length_202_cov_1.012903_g21216_i0 PRJNA734313 21329 202 1.012903 2.04606406 Eukaryota 2759 Plants Plants 363 7.149999999999999e-96   NTclustered gi|2249528557|gb|ON685378.1| 29818 g21216 i0 99.01 100 202 2 100 0 1 202 2401 2200 Plantago major isolate BPTPS058 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 20200 363 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Plantaginaceae Plantago Plantago major
14745628 14745628 PRJNA734313_S_NODE_15792_length_236_cov_9.285714_g15679_i0 PRJNA734313 15792 236 9.285714 21.91428504 Cannabis sativa 3483 Plants Plants 54.7 0.006   NTclustered gi|2748511602|gb|CP158658.1| 3483 g15679 i0 100 0.241525423728814 29 0 12 0 133 161 3771578 3771606 Cannabis sativa cultivar ERBxHO40_23 chromosome 7 blastn 57 54.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Cannabis Cannabis sativa
15225325 15225325 PRJNA734313_S_NODE_16572_length_230_cov_2.830601_g16459_i0 PRJNA734313 16572 230 2.830601 6.5103823 root 1 Root_unresolved Root_unresolved 52.8 0.021   NTclustered gi|2835530364|dbj|LC777194.1| 3329 g16459 i0 100 0.243478260869565 28 0 12 0 203 230 56 29 Picea abies Pa-Kumamoto-2022 PaMurA mRNA for UDP-N-acetylglucosamine1-carboxyvinyltransferase, complete cds blastn 56 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Picea Picea abies
16499779 16499779 PRJNA734313_S_NODE_5333_length_385_cov_4.298817_g5221_i0 PRJNA734313 5333 385 4.298817 16.55044545 Eukaryota 2759 Plants Plants 52.8 0.037   NTclustered gi|2835530366|dbj|LC777195.1| 3329 g5221 i0 100 0.290909090909091 28 0 7 0 1 28 29 56 Picea abies Pa-Kumamoto-2022 PaMurB mRNA for UDP-N-acetylmuramate dehydrogenase, complete cds blastn 112 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Picea Picea abies
17294743 17294743 PRJNA734313_S_NODE_15774_length_237_cov_1.078947_g15661_i0 PRJNA734313 15774 237 1.078947 2.55710439 Lilium hybrid cultivar 156531 Plants Plants 54.7 0.006   NTclustered gi|1789804197|gb|MF101406.2| 156531 g15661 i0 100 0.476793248945148 29 0 12 0 1 29 30 58 Lilium hybrid cultivar soluble starch synthase (SSS) mRNA, complete cds blastn 113 54.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Liliales Liliaceae Lilium Lilium hybrid cultivar
17294755 17294755 PRJNA734313_S_NODE_24554_length_187_cov_8.414286_g24441_i0 PRJNA734313 24554 187 8.414286 15.73471482 Cunninghamia lanceolata 28977 Plants Plants 52.8 0.016   NTclustered gi|1826605616|gb|MK585475.1| 28977 g24441 i0 100 0.149732620320856 28 0 15 0 3 30 1 28 Cunninghamia lanceolata pectin methylesterase 8 (PME8) mRNA, complete cds blastn 28 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cunninghamia Cunninghamia lanceolata
17774529 17774529 PRJNA734313_S_NODE_23134_length_193_cov_3.397260_g23021_i0 PRJNA734313 23134 193 3.39726 6.5567118 root 1 Root_unresolved Root_unresolved 52.8 0.017   NTclustered gi|2835530370|dbj|LC777197.1| 3329 g23021 i0 100 0.725388601036269 28 0 15 0 1 28 29 56 Picea abies Pa-Kumamoto-2022 PaMurD mRNA for UDP-MurNAc-L-alanyl-D-glutamate synthetase, complete cds blastn 140 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Picea Picea abies
17774532 17774532 PRJNA734313_S_NODE_25694_length_183_cov_1.250000_g25581_i0 PRJNA734313 25694 183 1.25 2.2875 Eukaryota 2759 Plants Plants 52.8 0.016   NTclustered gi|2835530376|dbj|LC777199.1| 3329 g25581 i0 100 0.306010928961749 28 0 15 0 156 183 404 377 Picea abies Pa-Kumamoto-2022 PaDdl mRNA for D-alanine-D-alanine ligase, complete cds blastn 56 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Picea Picea abies
17774536 17774536 PRJNA734313_S_NODE_7134_length_344_cov_2.377104_g7021_i0 PRJNA734313 7134 344 2.377104 8.17723776 Eukaryota 2759 Plants Plants 52.8 0.033   NTclustered gi|1228858195|ref|XM_022129704.1| 4232 g7021 i0 100 0.261627906976744 28 0 8 0 65 92 615 588 PREDICTED: Helianthus annuus kinesin-related protein 4-like (LOC110881447), mRNA blastn 90 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asterales Asteraceae Helianthus Helianthus annuus
20323278 20323278 PRJNA734313_S_NODE_7236_length_342_cov_1.210169_g7123_i0 PRJNA734313 7236 342 1.210169 4.13877798 root 1 Root_unresolved Root_unresolved 52.8 0.032   NTclustered gi|2835530364|dbj|LC777194.1| 3329 g7123 i0 100 0.16374269005848 28 0 8 0 315 342 56 29 Picea abies Pa-Kumamoto-2022 PaMurA mRNA for UDP-N-acetylglucosamine1-carboxyvinyltransferase, complete cds blastn 56 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Picea Picea abies
22394224 22394224 PRJNA734313_S_NODE_12618_length_264_cov_13.686636_g12505_i0 PRJNA734313 12618 264 13.686636 36.13271904 Luculia yunnanensis 1043446 Plants Plants 52.8 0.024   NTclustered gi|363453795|gb|JN871303.1| 1043446 g12505 i0 96.774 0.117424242424242 31 1 12 0 38 68 59 89 Luculia yunnanensis clone MH8 microsatellite sequence blastn 31 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Gentianales Rubiaceae Luculia Luculia yunnanensis
22874221 22874221 PRJNA734313_S_NODE_11538_length_276_cov_11.078603_g11425_i0 PRJNA734313 11538 276 11.078603 30.57694428 root 1 Root_unresolved Root_unresolved 52.8 0.025   NTclustered gi|2835530364|dbj|LC777194.1| 3329 g11425 i0 100 0.202898550724638 28 0 10 0 249 276 56 29 Picea abies Pa-Kumamoto-2022 PaMurA mRNA for UDP-N-acetylglucosamine1-carboxyvinyltransferase, complete cds blastn 56 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Picea Picea abies
22874226 22874226 PRJNA734313_S_NODE_15718_length_237_cov_1.815789_g15605_i0 PRJNA734313 15718 237 1.815789 4.30341993 root 1 Root_unresolved Root_unresolved 52.8 0.021   NTclustered gi|2835530370|dbj|LC777197.1| 3329 g15605 i0 100 0.725738396624473 28 0 12 0 210 237 56 29 Picea abies Pa-Kumamoto-2022 PaMurD mRNA for UDP-MurNAc-L-alanyl-D-glutamate synthetase, complete cds blastn 172 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Picea Picea abies
23669761 23669761 PRJNA734313_S_NODE_4539_length_408_cov_7.049861_g4428_i0 PRJNA734313 4539 408 7.049861 28.76343288 Triticum aestivum 4565 Plants Plants 56.5 0.003   NTclustered gi|1963662117|emb|LR861820.1| 4565 g4428 i0 100 0.281862745098039 30 0 7 0 1 30 6 35 Triticum aestivum mRNA for NB-LRR protein (Pm1 gene), cultivar Axminster, allele Pm1a blastn 115 56.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
24943150 24943150 PRJNA734313_S_NODE_12480_length_266_cov_2.100457_g12367_i0 PRJNA734313 12480 266 2.100457 5.58721562 Picea abies 3329 Plants Plants 52.8 0.024   NTclustered gi|2835530393|dbj|LC777203.1| 3329 g12367 i0 100 0.105263157894737 28 0 11 0 1 28 29 56 Picea abies Pa-Kumamoto-2022 PaMurJ mRNA for lipid II transferase, complete cds blastn 28 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Picea Picea abies
25423417 25423417 PRJNA734313_S_NODE_7080_length_345_cov_2.929530_g6967_i0 PRJNA734313 7080 345 2.92953 10.1068785 root 1 Root_unresolved Root_unresolved 52.8 0.033   NTclustered gi|2835530364|dbj|LC777194.1| 3329 g6967 i0 100 0.16231884057971 28 0 8 0 1 28 29 56 Picea abies Pa-Kumamoto-2022 PaMurA mRNA for UDP-N-acetylglucosamine1-carboxyvinyltransferase, complete cds blastn 56 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Picea Picea abies

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;