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contig_metadata

43 rows where analysis = "blastn", bioproject = "PRJNA734313" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 43 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA734313 · 43 ✖

analysis 1

  • blastn · 43 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
716697 716697 PRJNA734313_S_NODE_20121_length_208_cov_1.503106_g20008_i0 PRJNA734313 20121 208 1.503106 3.12646048 Mus musculus 10090 Chordata Chordata 385 1.58e-102   NTclustered gi|12846704|dbj|AK010927.1| 10090 g20008 i0 100 98.5384615384615 208 0 100 0 1 208 449 242 Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:2510008C04 product:hemoglobin, beta adult major chain, full insert sequence blastn 20496 385 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
716700 716700 PRJNA734313_S_NODE_21521_length_201_cov_1.227273_g21408_i0 PRJNA734313 21521 201 1.227273 2.46681873 Ovis aries 9940 Chordata Chordata 250 5.78e-62   NTclustered gi|2606984091|ref|XM_060404714.1| 9940 g21408 i0 94.048 1.82089552238806 168 5 84 3 32 199 4286 4124 PREDICTED: Ovis aries Mab-21 domain containing 2 (MB21D2), transcript variant X2, mRNA blastn 366 250 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Ovis Ovis aries
716707 716707 PRJNA734313_S_NODE_30161_length_168_cov_1.264463_g30048_i0 PRJNA734313 30161 168 1.264463 2.12429784 Orcinus orca 9733 Chordata Chordata 124 2.9499999999999994e-24   NTclustered gi|2280631539|ref|XM_033440566.2| 9733 g30048 i0 83.846 72.4702380952381 130 21 77 0 25 154 1588 1459 PREDICTED: Orcinus orca interleukin 1 receptor associated kinase 3 (IRAK3), transcript variant X7, mRNA blastn 12175 124 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Orcinus Orcinus orca
1992722 1992722 PRJNA734313_S_NODE_32922_length_163_cov_0.879310_g32809_i0 PRJNA734313 32922 163 0.87931 1.4332753 Mus musculus 10090 Chordata Chordata 302 1.22e-77   NTclustered gi|2510669988|gb|OQ871524.1| 10090 g32809 i0 100 75.3067484662577 163 0 100 0 1 163 41875 42037 Mus musculus clone BAC 46_1b 45S ribosomal RNA and 18S ribosomal RNA genes, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, 28S ribosomal RNA gene, 3' and 5' external transcribed spacers, complete sequence; and 18S ribosomal RNA gene, partial sequence blastn 12275 302 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
2472122 2472122 PRJNA734313_S_NODE_33802_length_161_cov_1.789474_g33689_i0 PRJNA734313 33802 161 1.789474 2.88105314 Artiodactyla 91561 Chordata Chordata 191 2.72e-44   NTclustered gi|2871675146|ref|XM_070473067.1| 9874 g33689 i0 92.481 573.583850931677 133 10 83 0 1 133 1664 1796 PREDICTED: Odocoileus virginianus steroid 5 alpha-reductase 2 (SRD5A2), mRNA blastn 92347 191 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Odocoileus Odocoileus virginianus
2472123 2472123 PRJNA734313_S_NODE_34682_length_160_cov_1.353982_g34569_i0 PRJNA734313 34682 160 1.353982 2.1663712 Bovidae 9895 Chordata Chordata 124 2.77e-24   NTclustered gi|2633718086|ref|XM_061436641.1| 9906 g34569 i0 92.941 59.5625 85 6 53 0 1 85 4568 4652 PREDICTED: Bos javanicus mitochondrial antiviral signaling protein (MAVS), transcript variant X3, mRNA blastn 9530 124 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos javanicus
3268016 3268016 PRJNA734313_S_NODE_16863_length_228_cov_1.690608_g16750_i0 PRJNA734313 16863 228 1.6906080000000001 3.85458624 Moschus berezovskii 68408 Chordata Chordata 351 1.79e-92   NTclustered gi|2492287922|ref|XM_055411167.1| 68408 g16750 i0 95.067 15.6228070175439 223 11 98 0 3 225 2447 2669 PREDICTED: Moschus berezovskii protein tyrosine phosphatase receptor type H (PTPRH), mRNA blastn 3562 351 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Moschidae Moschus Moschus berezovskii
3748466 3748466 PRJNA734313_S_NODE_10343_length_291_cov_733.278689_g10230_i0 PRJNA734313 10343 291 733.278689 2133.84098499 root 1 Root_unresolved Root_unresolved 132 3.37e-26   NTclustered gi|2645168801|gb|OR992004.1| 10090 g10230 i0 98.649 28.144329896907202 74 1 25 0 1 74 4385 4312 Mus musculus transgenic puromycin-resistant protein (Puro) gene, complete cds; red fluorescence protein (RFP) gene, complete sequence; and GFP-I-SceI (GFP-I-SceI) gene, complete cds blastn 8190 132 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
4545186 4545186 PRJNA734313_S_NODE_16544_length_231_cov_1.108696_g16431_i0 PRJNA734313 16544 231 1.108696 2.56108776 Mus musculus 10090 Chordata Chordata 411 2.9599999999999995e-110   NTclustered gi|83721761|gb|AC102815.31| 10090 g16431 i0 98.707 3.01298701298701 232 2 100 1 1 231 145713 145944 Mus musculus chromosome 14, clone RP23-55A5, complete sequence blastn 696 411 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
5025021 5025021 PRJNA734313_S_NODE_26124_length_181_cov_1.522388_g26011_i0 PRJNA734313 26124 181 1.522388 2.75552228 Artiodactyla 91561 Chordata Chordata 134 5.34e-27   NTclustered gi|2487116725|ref|XM_024126477.3| 9755 g26011 i0 83.221 68.2872928176796 149 21 82 4 11 158 6160 6305 PREDICTED: Physeter macrocephalus shortage in chiasmata 1 (SHOC1), mRNA blastn 12360 135 0.992592592592593 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Physeteridae Physeter Physeter macrocephalus
5820292 5820292 PRJNA734313_S_NODE_23365_length_192_cov_6.379310_g23252_i0 PRJNA734313 23365 192 6.37931 12.2482752 Protobothrops mucrosquamatus 103944 Chordata Chordata 58.4 3.55e-4   NTclustered gi|1002606825|ref|XM_015827207.1| 103944 g23252 i0 100 0.307291666666667 31 0 16 0 1 31 1 31 PREDICTED: Protobothrops mucrosquamatus SEC13 homolog, nuclear pore and COPII coat complex component (SEC13), mRNA blastn 59 58.4 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Viperidae Protobothrops Protobothrops mucrosquamatus
7095371 7095371 PRJNA734313_S_NODE_11206_length_281_cov_1.192308_g11093_i0 PRJNA734313 11206 281 1.192308 3.35038548 Mus musculus 10090 Chordata Chordata 520 5.909999999999999e-143   NTclustered gi|25267596|emb|AL929142.6| 10090 g11093 i0 100 1 281 0 100 0 1 281 200391 200671 Mouse DNA sequence from clone RP23-340A13 on chromosome 2, complete sequence blastn 281 520 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
7095391 7095391 PRJNA734313_S_NODE_34106_length_161_cov_0.894737_g33993_i0 PRJNA734313 34106 161 0.894737 1.44052657 Rousettus aegyptiacus 9407 Chordata Chordata 65.8 1.72e-6   NTclustered gi|1910427189|ref|XM_036225340.1| 9407 g33993 i0 83.784 0.695652173913043 74 6 43 6 63 131 12120 12048 PREDICTED: Rousettus aegyptiacus cell death inducing p53 target 1 (CDIP1), transcript variant X3, mRNA blastn 112 65.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Pteropodidae Rousettus Rousettus aegyptiacus
9645189 9645189 PRJNA734313_S_NODE_28328_length_174_cov_1.204724_g28215_i0 PRJNA734313 28328 174 1.204724 2.09621976 Ailuropoda melanoleuca 9646 Chordata Chordata 78.7 2.41e-10   NTclustered gi|1845402759|ref|XM_019802057.2| 9646 g28215 i0 90.164 1.96551724137931 61 5 34 1 85 144 2523 2463 PREDICTED: Ailuropoda melanoleuca BPI fold containing family C (BPIFC), transcript variant X1, mRNA blastn 342 78.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Ursidae Ailuropoda Ailuropoda melanoleuca
9645197 9645197 PRJNA734313_S_NODE_35788_length_159_cov_0.910714_g35675_i0 PRJNA734313 35788 159 0.910714 1.44803526 Bubalus kerabau 3119969 Chordata Chordata 65.8 1.69e-6   NTclustered gi|2496406780|ref|XR_008699770.1| 3119969 g35675 i0 100 0.220125786163522 35 0 22 0 1 35 207 241 PREDICTED: Bubalus kerabau uncharacterized LOC129621867 (LOC129621867), ncRNA blastn 35 65.8 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bubalus Bubalus kerabau
10125344 10125344 PRJNA734313_S_NODE_24068_length_189_cov_8.542254_g23955_i0 PRJNA734313 24068 189 8.542254 16.14486006 root 1 Root_unresolved Root_unresolved 239 1.16e-58   NTclustered gi|2645168801|gb|OR992004.1| 10090 g23955 i0 89.418 104 189 20 100 0 1 189 4510 4322 Mus musculus transgenic puromycin-resistant protein (Puro) gene, complete cds; red fluorescence protein (RFP) gene, complete sequence; and GFP-I-SceI (GFP-I-SceI) gene, complete cds blastn 19656 239 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
12196027 12196027 PRJNA734313_S_NODE_12090_length_270_cov_2.677130_g11977_i0 PRJNA734313 12090 270 2.67713 7.228251 Bos taurus 9913 Chordata Chordata 459 1.2499999999999999e-124   NTclustered gi|2587694420|ref|XM_059889318.1| 9913 g11977 i0 97.407 470.681481481481 270 5 100 1 1 270 4143 3876 PREDICTED: Bos taurus NIMA related kinase 1 (NEK1), transcript variant X8, mRNA blastn 127084 459 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
12196035 12196035 PRJNA734313_S_NODE_18710_length_216_cov_1.508876_g18597_i0 PRJNA734313 18710 216 1.508876 3.25917216 Bos taurus 9913 Chordata Chordata 374 3.5799999999999997e-99   NTclustered gi|3133059|emb|Y17260.1| 9913 g18597 i0 98.148 68.5324074074074 216 0 100 3 1 216 3921 4132 Bos taurus StAR gene blastn 14803 374 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
12196041 12196041 PRJNA734313_S_NODE_25490_length_184_cov_1.116788_g25377_i0 PRJNA734313 25490 184 1.116788 2.05488992 Moschus berezovskii 68408 Chordata Chordata 233 5.22e-57   NTclustered gi|2492278422|ref|XM_055406607.1| 68408 g25377 i0 94.156 703.119565217391 154 8 83 1 31 183 779 932 PREDICTED: Moschus berezovskii CST telomere replication complex component 1 (CTC1), transcript variant X2, mRNA blastn 129374 233 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Moschidae Moschus Moschus berezovskii
13950679 13950679 PRJNA734313_S_NODE_29691_length_169_cov_1.672131_g29578_i0 PRJNA734313 29691 169 1.672131 2.82590139 Bos 9903 Chordata Chordata 82.4 1.8e-11   NTclustered gi|328672354|tpe|BN001315.1| 9913 g29578 i0 88.235 11.8343195266272 68 8 40 0 2 69 92323 92390 TPA_exp: Bos taurus MUC16 gene for mucin-16, exons 1-52 blastn 2000 82.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
13950681 13950681 PRJNA734313_S_NODE_33711_length_161_cov_1820.219298_g33598_i0 PRJNA734313 33711 161 1820.219298 2930.55306978 root 1 Root_unresolved Root_unresolved 195 2.1e-45   NTclustered gi|2645168801|gb|OR992004.1| 10090 g33598 i0 97.368 120.204968944099 114 3 100 0 48 161 4272 4385 Mus musculus transgenic puromycin-resistant protein (Puro) gene, complete cds; red fluorescence protein (RFP) gene, complete sequence; and GFP-I-SceI (GFP-I-SceI) gene, complete cds blastn 19353 195 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
16019224 16019224 PRJNA734313_S_NODE_18133_length_220_cov_0.884393_g18020_i0 PRJNA734313 18133 220 0.884393 1.9456646 Mus musculus 10090 Chordata Chordata 407 3.61e-109   NTclustered gi|71480384|gb|AC158365.2| 10090 g18020 i0 100 7.16818181818182 220 0 100 0 1 220 173452 173671 Mus musculus BAC clone RP23-182N12 from chromosome 12, complete sequence blastn 1577 407 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
16019231 16019231 PRJNA734313_S_NODE_22393_length_197_cov_1.020000_g22280_i0 PRJNA734313 22393 197 1.02 2.0094 Mus musculus 10090 Chordata Chordata 364 1.929999999999999e-96   NTclustered gi|18043937|gb|BC019725.1| 10090 g22280 i0 100 99.2690355329949 197 0 100 0 1 197 264 460 Mus musculus ribosomal protein S10, mRNA (cDNA clone MGC:30579 IMAGE:3497741), complete cds blastn 19556 364 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
16499775 16499775 PRJNA734313_S_NODE_27093_length_178_cov_1.167939_g26980_i0 PRJNA734313 27093 178 1.167939 2.07893142 Artiodactyla 91561 Chordata Chordata 147 6.72e-31   NTclustered gi|2280631281|ref|XM_033405134.2| 9733 g26980 i0 87.313 13.061797752809 134 9 74 4 1 131 405 533 PREDICTED: Orcinus orca TEF transcription factor, PAR bZIP family member (TEF), transcript variant X8, mRNA blastn 2325 147 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Orcinus Orcinus orca
17294759 17294759 PRJNA734313_S_NODE_30714_length_166_cov_1.714286_g30601_i0 PRJNA734313 30714 166 1.714286 2.84571476 Bos taurus 9913 Chordata Chordata 307 2.69e-79   NTclustered gi|2587618203|ref|XR_009493738.1| 9913 g30601 i0 100 131.903614457831 166 0 100 0 1 166 8006 7841 PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344779), transcript variant X2, ncRNA blastn 21896 307 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
18568459 18568459 PRJNA734313_S_NODE_11535_length_277_cov_1.217391_g11422_i0 PRJNA734313 11535 277 1.217391 3.37217307 Mus musculus 10090 Chordata Chordata 54.7 0.007   NTclustered gi|71533340|gb|AC156162.2| 10090 g11422 i0 100 0.104693140794224 29 0 10 0 161 189 100755 100783 Mus musculus BAC clone RP24-342A17 from chromosome 9, complete sequence blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
18568472 18568472 PRJNA734313_S_NODE_22695_length_195_cov_2.790541_g22582_i0 PRJNA734313 22695 195 2.790541 5.44155495 Protopterus annectens 7888 Chordata Chordata 52.8 0.017   NTclustered gi|2119003049|ref|XM_044070430.1| 7888 g22582 i0 100 1.57948717948718 28 0 14 0 143 170 1890 1863 PREDICTED: Protopterus annectens ArfGAP with FG repeats 1 (AGFG1), transcript variant X1, mRNA blastn 308 52.8 1 Eukaryota Opisthokonta Metazoa Chordata   Ceratodontiformes Protopteridae Protopterus Protopterus annectens
18568479 18568479 PRJNA734313_S_NODE_28075_length_174_cov_5.724409_g27962_i0 PRJNA734313 28075 174 5.724409 9.96047166 Protobothrops mucrosquamatus 103944 Chordata Chordata 52.8 0.015   NTclustered gi|1002606825|ref|XM_015827207.1| 103944 g27962 i0 100 0.160919540229885 28 0 16 0 1 28 4 31 PREDICTED: Protobothrops mucrosquamatus SEC13 homolog, nuclear pore and COPII coat complex component (SEC13), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Viperidae Protobothrops Protobothrops mucrosquamatus
18568489 18568489 PRJNA734313_S_NODE_36975_length_157_cov_0.927273_g36862_i0 PRJNA734313 36975 157 0.927273 1.45581861 Bos taurus 9913 Chordata Chordata 291 2.52e-74   NTclustered gi|197322348|gb|AC164336.3| 9913 g36862 i0 100 99.9363057324841 157 0 100 0 1 157 12958 13114 Bos taurus Y Chr BAC CH240-150I5 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence blastn 15690 291 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
19048551 19048551 PRJNA734313_S_NODE_20675_length_205_cov_1.613924_g20562_i0 PRJNA734313 20675 205 1.613924 3.3085442 Metazoa 33208 Chordata Chordata 379 7.229999999999999e-101   NTclustered gi|846387676|dbj|LC061971.1| 10090 g20562 i0 100 100 205 0 100 0 1 205 1681 1477 Mus musculus mitochondrion DNA, including COX1, tRNA-Ser, tRNA-Asp, COX2, tRNA-Lys, ATP8, ATP6 genes, complete sequence, sequence_id: (5951..8605)_20 blastn 20500 379 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
19843634 19843634 PRJNA734313_S_NODE_16016_length_235_cov_1.085106_g15903_i0 PRJNA734313 16016 235 1.085106 2.5499991 Bos taurus 9913 Chordata Chordata 435 1.79e-117   NTclustered gi|2587658624|ref|XR_009492068.1| 9913 g15903 i0 100 1 235 0 100 0 1 235 4855 5089 PREDICTED: Bos taurus small ribosomal subunit protein eS25-like (LOC107131615), misc_RNA blastn 235 435 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
19843640 19843640 PRJNA734313_S_NODE_21136_length_203_cov_0.980769_g21023_i0 PRJNA734313 21136 203 0.980769 1.99096107 Mus musculus 10090 Chordata Chordata 375 9.24e-100   NTclustered gi|74177574|dbj|AK166618.1| 10090 g21023 i0 100 99.1083743842365 203 0 100 0 1 203 775 573 Mus musculus 1 cell embryo 1 cell cDNA, RIKEN full-length enriched library, clone:I0C0039C20 product:proteasome (prosome, macropain) subunit, alpha type 4, full insert sequence blastn 20119 375 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
19843651 19843651 PRJNA734313_S_NODE_33576_length_162_cov_0.886957_g33463_i0 PRJNA734313 33576 162 0.886957 1.43687034 Acinonyx jubatus 32536 Chordata Chordata 171 3.57e-38   NTclustered gi|2437666194|ref|XR_008291035.1| 32536 g33463 i0 87.755 0.907407407407407 147 17 90 1 17 162 483 337 PREDICTED: Acinonyx jubatus uncharacterized LOC128312134 (LOC128312134), ncRNA blastn 147 171 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Felidae Acinonyx Acinonyx jubatus
20323271 20323271 PRJNA734313_S_NODE_21796_length_199_cov_953.434211_g21683_i0 PRJNA734313 21796 199 953.434211 1897.33407989 root 1 Root_unresolved Root_unresolved 285 1.56e-72   NTclustered gi|2645168801|gb|OR992004.1| 10090 g21683 i0 92.462 106.221105527638 199 15 100 0 1 199 4187 4385 Mus musculus transgenic puromycin-resistant protein (Puro) gene, complete cds; red fluorescence protein (RFP) gene, complete sequence; and GFP-I-SceI (GFP-I-SceI) gene, complete cds blastn 21138 285 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
21119281 21119281 PRJNA734313_S_NODE_17197_length_226_cov_1.139665_g17084_i0 PRJNA734313 17197 226 1.139665 2.5756429 Bos mutus 72004 Chordata Chordata 364 2.2699999999999992e-96   NTclustered gi|2868788911|ref|XM_070371460.1| 72004 g17084 i0 99.015 64.1814159292035 203 2 90 0 24 226 6459 6661 PREDICTED: Bos mutus Rho GTPase activating protein 8 (ARHGAP8), mRNA blastn 14505 364 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos mutus
21119285 21119285 PRJNA734313_S_NODE_18217_length_219_cov_1.755814_g18104_i0 PRJNA734313 18217 219 1.755814 3.84523266 Bos taurus 9913 Chordata Chordata 394 2.79e-105   NTclustered gi|2587670975|ref|XR_240347.5| 9913 g18104 i0 99.087 2.2648401826484 219 2 100 0 1 219 2397 2615 PREDICTED: Bos taurus uncharacterized lncRNA (LOC101903828), ncRNA blastn 496 394 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
22394230 22394230 PRJNA734313_S_NODE_17778_length_222_cov_1.525714_g17665_i0 PRJNA734313 17778 222 1.525714 3.38708508 Apteryx mantelli 2696672 Chordata Chordata 54.7 0.005   NTclustered gi|840012306|emb|LK064672.1| 202946 g17665 i0 100 0.261261261261261 29 0 13 0 181 209 1882769 1882741 Apteryx australis mantelli genome assembly AptMant0, scaffold scaffold57 blastn 58 54.7 1 Eukaryota Opisthokonta Metazoa Chordata Aves Apterygiformes Apterygidae Apteryx Apteryx mantelli
22394241 22394241 PRJNA734313_S_NODE_30398_length_167_cov_1.641667_g30285_i0 PRJNA734313 30398 167 1.641667 2.74158389 Mus musculus 10090 Chordata Chordata 303 3.5e-78   NTclustered gi|56029756|dbj|AK205579.1| 10090 g30285 i0 99.401 90.0718562874251 167 1 100 0 1 167 138 304 Mus musculus cDNA, clone:Y2G0102C16, strand:plus, reference:ENSEMBL:Mouse-Transcript-ENST:ENSMUST00000056887, based on BLAT search blastn 15042 303 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
22874230 22874230 PRJNA734313_S_NODE_27718_length_176_cov_1.186047_g27605_i0 PRJNA734313 27718 176 1.186047 2.08744272 root 1 Root_unresolved Root_unresolved 326 7.92e-85   NTclustered gi|2645168801|gb|OR992004.1| 10090 g27605 i0 100 100 176 0 100 0 1 176 271 446 Mus musculus transgenic puromycin-resistant protein (Puro) gene, complete cds; red fluorescence protein (RFP) gene, complete sequence; and GFP-I-SceI (GFP-I-SceI) gene, complete cds blastn 17600 326 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
23669738 23669738 PRJNA734313_S_NODE_15819_length_236_cov_2.740741_g15706_i0 PRJNA734313 15819 236 2.740741 6.46814876 Protobothrops mucrosquamatus 103944 Chordata Chordata 52.8 0.021   NTclustered gi|1663486693|ref|XM_029287056.1| 103944 g15706 i0 100 0.11864406779661 28 0 12 0 208 235 28 1 PREDICTED: Protobothrops mucrosquamatus 28S ribosomal protein S11, mitochondrial (LOC107300900), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Lepidosauria Squamata Viperidae Protobothrops Protobothrops mucrosquamatus
23669767 23669767 PRJNA734313_S_NODE_8079_length_327_cov_1.271429_g7966_i0 PRJNA734313 8079 327 1.271429 4.15757283 Bos taurus 9913 Chordata Chordata 156 2.28e-33   NTclustered gi|50872235|gb|AC149782.2| 9913 g7966 i0 79.325 21.5290519877676 237 38 70 6 34 262 14326 14093 Bos taurus BAC CH240-6M21 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence blastn 7040 156 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
24943162 24943162 PRJNA734313_S_NODE_23480_length_192_cov_1.406897_g23367_i0 PRJNA734313 23480 192 1.406897 2.70124224 Bos taurus 9913 Chordata Chordata 348 1.88e-91   NTclustered gi|1068294018|gb|KX592814.1| 9913 g23367 i0 99.479 52.4427083333333 192 0 100 1 1 192 10111881 10111691 Bos taurus isolate Dominette_000065F genomic sequence blastn 10069 348 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bos Bos taurus
24943168 24943168 PRJNA734313_S_NODE_28300_length_174_cov_1.204724_g28187_i0 PRJNA734313 28300 174 1.204724 2.09621976 Mus musculus 10090 Chordata Chordata 322 1.01e-83   NTclustered gi|169635832|emb|CU463333.16| 10090 g28187 i0 100 99.9770114942529 174 0 100 0 1 174 67001 67174 Mouse DNA sequence from clone DN-28J7 on chromosome 17, complete sequence blastn 17396 322 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;