contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA734313" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3268027 | 3268027 | PRJNA734313_S_NODE_30183_length_168_cov_1.264463_g30070_i0 | PRJNA734313 | 30183 | 168 | 1.264463 | 2.12429784 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 311 | 2.11e-80 | NTclustered | gi|2769739957|gb|CP160078.1| | 147802 | g30070 | i0 | 100 | 503.559523809524 | 168 | 0 | 100 | 0 | 1 | 168 | 380763 | 380596 | Lactobacillus iners strain 0998_735_1_CBA_90B_S800 chromosome, complete genome | blastn | 84598 | 311 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 8369999 | 8369999 | PRJNA734313_S_NODE_20927_length_204_cov_1.242038_g20814_i0 | PRJNA734313 | 20927 | 204 | 1.242038 | 2.53375752 | Streptococcus koreensis | 2382163 | Bacteria | Bacteria | 331 | 2.04e-86 | NTclustered | gi|1487524770|gb|CP032620.1| | 2382163 | g20814 | i0 | 98.925 | 373.759803921569 | 186 | 1 | 91 | 1 | 1 | 186 | 67769 | 67953 | Streptococcus koreensis strain JS71 chromosome, complete genome | blastn | 76247 | 331 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus koreensis | ||
| 8370001 | 8370001 | PRJNA734313_S_NODE_21447_length_201_cov_1.655844_g21334_i0 | PRJNA734313 | 21447 | 201 | 1.655844 | 3.32824644 | Peptoniphilus harei | 54005 | Bacteria | Bacteria | 333 | 5.569999999999999e-87 | NTclustered | gi|1958280563|gb|CP068103.1| | 54005 | g21334 | i0 | 96.535 | 485.557213930348 | 202 | 6 | 100 | 1 | 1 | 201 | 600927 | 601128 | Peptoniphilus harei strain FDAARGOS_1136 chromosome, complete genome | blastn | 97597 | 333 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Peptoniphilus | Peptoniphilus harei | ||
| 8370010 | 8370010 | PRJNA734313_S_NODE_35387_length_159_cov_1.339286_g35274_i0 | PRJNA734313 | 35387 | 159 | 1.339286 | 2.12946474 | Parvimonas micra | 33033 | Bacteria | Bacteria | 289 | 9.22e-74 | NTclustered | gi|2418006839|gb|CP101410.1| | 33033 | g35274 | i0 | 100 | 498.503144654088 | 156 | 0 | 100 | 0 | 4 | 159 | 314133 | 313978 | Parvimonas micra strain PM89KC-G-2 chromosome, complete genome | blastn | 79262 | 289 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Parvimonas | Parvimonas micra | ||
| 10920645 | 10920645 | PRJNA734313_S_NODE_13069_length_260_cov_1.676056_g12956_i0 | PRJNA734313 | 13069 | 260 | 1.676056 | 4.3577456 | Lactobacillus iners | 147802 | Bacteria | Bacteria | 481 | 2.55e-131 | NTclustered | gi|2769739957|gb|CP160078.1| | 147802 | g12956 | i0 | 100 | 524 | 260 | 0 | 100 | 0 | 1 | 260 | 3160 | 2901 | Lactobacillus iners strain 0998_735_1_CBA_90B_S800 chromosome, complete genome | blastn | 136240 | 481 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus iners | ||
| 12196031 | 12196031 | PRJNA734313_S_NODE_16910_length_228_cov_1.127072_g16797_i0 | PRJNA734313 | 16910 | 228 | 1.127072 | 2.56972416 | Staphylococcus epidermidis | 1282 | Bacteria | Bacteria | 422 | 1.34e-113 | NTclustered | gi|2536852070|gb|CP129374.1| | 1282 | g16797 | i0 | 100 | 99.9912280701754 | 228 | 0 | 100 | 0 | 1 | 228 | 1205465 | 1205238 | Staphylococcus epidermidis strain CSMH-411EB chromosome, complete genome | blastn | 22798 | 422 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 12196034 | 12196034 | PRJNA734313_S_NODE_18270_length_219_cov_1.186047_g18157_i0 | PRJNA734313 | 18270 | 219 | 1.186047 | 2.59744293 | Nosocomiicoccus massiliensis | 1232430 | Bacteria | Bacteria | 198 | 2.35e-46 | NTclustered | gi|2612677914|gb|CP136964.1| | 1232430 | g18157 | i0 | 83.105 | 77.7351598173516 | 219 | 35 | 99 | 2 | 1 | 218 | 139433 | 139216 | Nosocomiicoccus massiliensis strain UMB0959 chromosome, complete genome | blastn | 17024 | 198 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Nosocomiicoccus | Nosocomiicoccus massiliensis | ||
| 12196052 | 12196052 | PRJNA734313_S_NODE_7290_length_341_cov_1.292517_g7177_i0 | PRJNA734313 | 7290 | 341 | 1.292517 | 4.40748297 | Paenibacillus sp. HWE-109 | 1306526 | Bacteria | Bacteria | 580 | 3.319999999999999e-161 | NTclustered | gi|2191894512|gb|CP091881.1| | 1306526 | g7177 | i0 | 99.375 | 972.50146627566 | 320 | 2 | 94 | 0 | 22 | 341 | 7633397 | 7633078 | Paenibacillus sp. HWE-109 chromosome | blastn | 331623 | 580 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus sp. HWE-109 | ||
| 16499769 | 16499769 | PRJNA734313_S_NODE_16013_length_235_cov_1.143617_g15900_i0 | PRJNA734313 | 16013 | 235 | 1.143617 | 2.68749995 | Bacillati | 1783272 | Bacteria | Bacteria | 435 | 1.79e-117 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g15900 | i0 | 100 | 518.56170212766 | 235 | 0 | 100 | 0 | 1 | 235 | 748658 | 748892 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 121862 | 435 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 21598946 | 21598946 | PRJNA734313_S_NODE_29897_length_169_cov_1.155738_g29784_i0 | PRJNA734313 | 29897 | 169 | 1.155738 | 1.95319722 | Streptococcus | 1301 | Bacteria | Bacteria | 231 | 1.6899999999999998e-56 | NTclustered | gi|1782758915|gb|CP018189.1| | 1304 | g29784 | i0 | 94.667 | 510.568047337278 | 150 | 6 | 88 | 2 | 1 | 148 | 17717 | 17866 | Streptococcus salivarius strain ICDC3 chromosome, complete genome | blastn | 86286 | 233 | 0.991416309012876 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus salivarius | ||
| 24148385 | 24148385 | PRJNA734313_S_NODE_23939_length_190_cov_1.426573_g23826_i0 | PRJNA734313 | 23939 | 190 | 1.426573 | 2.7104887 | Streptococcus | 1301 | Bacteria | Bacteria | 346 | 6.690000000000001e-91 | NTclustered | gi|2179903814|gb|CP046525.1| | 68892 | g23826 | i0 | 99.474 | 99.6052631578947 | 190 | 1 | 100 | 0 | 1 | 190 | 1501332 | 1501521 | Streptococcus infantis strain SO chromosome, complete genome | blastn | 18925 | 346 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus infantis | ||
| 24148387 | 24148387 | PRJNA734313_S_NODE_27279_length_177_cov_1.569231_g27166_i0 | PRJNA734313 | 27279 | 177 | 1.569231 | 2.77753887 | Abiotrophia | 46123 | Bacteria | Bacteria | 305 | 1.04e-78 | NTclustered | gi|1848537030|gb|CP053988.1| | 46125 | g27166 | i0 | 97.74 | 2 | 177 | 4 | 100 | 0 | 1 | 177 | 351544 | 351720 | Abiotrophia defectiva strain FDAARGOS_785 chromosome, complete genome | blastn | 354 | 305 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Aerococcaceae | Abiotrophia | Abiotrophia defectiva |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;