contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA733995" and tax_clade = "FCB group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 716599 | 716599 | PRJNA733995_P_NODE_10481_length_268_cov_1.230769_g10434_i0 | PRJNA733995 | 10481 | 268 | 1.230769 | 3.29846092 | Epilithonimonas vandammei | 2487072 | Bacteria | Bacteria | 496 | 9.429999999999999e-136 | NTclustered | gi|1527187866|gb|CP034161.1| | 2487072 | g10434 | i0 | 100 | 87.3619402985075 | 268 | 0 | 100 | 0 | 1 | 268 | 3078773 | 3078506 | Epilithonimonas vandammei strain F5649 chromosome, complete genome | blastn | 23413 | 496 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Epilithonimonas | Epilithonimonas vandammei | |
| 716665 | 716665 | PRJNA733995_P_NODE_6681_length_332_cov_1.189189_g6634_i0 | PRJNA733995 | 6681 | 332 | 1.189189 | 3.94810748 | Sediminibacterium sp. KACHI17 | 1751071 | Bacteria | Bacteria | 470 | 7.289999999999999e-128 | NTclustered | gi|2690291631|dbj|AP029612.1| | 1751071 | g6634 | i0 | 92.216 | 131.927710843373 | 334 | 22 | 100 | 4 | 1 | 332 | 2977695 | 2978026 | Sediminibacterium sp. KACHI17 DNA, complete genome | blastn | 43800 | 470 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Sediminibacterium | Sediminibacterium sp. KACHI17 | |
| 5820193 | 5820193 | PRJNA733995_P_NODE_11945_length_251_cov_0.865169_g11898_i0 | PRJNA733995 | 11945 | 251 | 0.865169 | 2.17157419 | uncultured Chitinophagaceae bacterium | 866510 | Bacteria | Bacteria | 137 | 6.100000000000001e-28 | NTclustered | gi|2874253850|emb|OY969906.1| | 866510 | g11898 | i0 | 77.447 | 3.06772908366534 | 235 | 50 | 93 | 3 | 16 | 249 | 3699860 | 3699628 | MAG: uncultured Chitinophagaceae bacterium isolate MFD05502.bin.c.1 genome assembly, chromosome: 1 | blastn | 770 | 137 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | uncultured Chitinophagaceae bacterium | ||
| 5820232 | 5820232 | PRJNA733995_P_NODE_3625_length_461_cov_2.829897_g3578_i0 | PRJNA733995 | 3625 | 461 | 2.829897 | 13.04582517 | Sediminibacterium sp. KACHI17 | 1751071 | Bacteria | Bacteria | 577 | 5.969999999999999e-160 | NTclustered | gi|2690291631|dbj|AP029612.1| | 1751071 | g3578 | i0 | 99.683 | 216.377440347072 | 315 | 1 | 97 | 0 | 1 | 315 | 2978449 | 2978763 | Sediminibacterium sp. KACHI17 DNA, complete genome | blastn | 99750 | 577 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Sediminibacterium | Sediminibacterium sp. KACHI17 | |
| 8849749 | 8849749 | PRJNA733995_P_NODE_11007_length_261_cov_2.436170_g10960_i0 | PRJNA733995 | 11007 | 261 | 2.43617 | 6.3584037 | Bacteroidota | 976 | Bacteria | Bacteria | 200 | 8.029999999999999e-47 | NTclustered | gi|1616390602|gb|CP038810.1| | 2518177 | g10960 | i0 | 81.667 | 1.76628352490421 | 240 | 44 | 92 | 0 | 22 | 261 | 1199856 | 1200095 | Flavobacterium sangjuense strain GS03 chromosome, complete genome | blastn | 461 | 200 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Flavobacteriaceae | Flavobacterium | Flavobacterium sangjuense | |
| 19843536 | 19843536 | PRJNA733995_P_NODE_12216_length_249_cov_3.534091_g12169_i0 | PRJNA733995 | 12216 | 249 | 3.534091 | 8.79988659 | Sediminibacterium sp. KACHI17 | 1751071 | Bacteria | Bacteria | 405 | 1.5e-108 | NTclustered | gi|2690291631|dbj|AP029612.1| | 1751071 | g12169 | i0 | 96.371 | 269.582329317269 | 248 | 5 | 99 | 2 | 2 | 249 | 2979471 | 2979228 | Sediminibacterium sp. KACHI17 DNA, complete genome | blastn | 67126 | 405 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Sediminibacterium | Sediminibacterium sp. KACHI17 | |
| 21119180 | 21119180 | PRJNA733995_P_NODE_12017_length_251_cov_0.865169_g11970_i0 | PRJNA733995 | 12017 | 251 | 0.865169 | 2.17157419 | Sediminibacterium sp. KACHI17 | 1751071 | Bacteria | Bacteria | 220 | 5.89e-53 | NTclustered | gi|2690291631|dbj|AP029612.1| | 1751071 | g11970 | i0 | 83.691 | 3.29083665338645 | 233 | 38 | 93 | 0 | 2 | 234 | 2814172 | 2813940 | Sediminibacterium sp. KACHI17 DNA, complete genome | blastn | 826 | 220 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Sediminibacterium | Sediminibacterium sp. KACHI17 | |
| 23669719 | 23669719 | PRJNA733995_P_NODE_8779_length_290_cov_1.373272_g8732_i0 | PRJNA733995 | 8779 | 290 | 1.373272 | 3.9824888 | Sediminibacterium sp. TEGAF015 | 575378 | Bacteria | Bacteria | 418 | 2.3e-112 | NTclustered | gi|2285221741|dbj|AP026683.1| | 575378 | g8732 | i0 | 92.734 | 1.99310344827586 | 289 | 21 | 99 | 0 | 1 | 289 | 1453979 | 1453691 | Sediminibacterium sp. TEGAF015 DNA, complete genome | blastn | 578 | 418 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagaceae | Sediminibacterium | Sediminibacterium sp. TEGAF015 | |
| 24943115 | 24943115 | PRJNA733995_P_NODE_5660_length_361_cov_3.427083_g5613_i0 | PRJNA733995 | 5660 | 361 | 3.427083 | 12.37176963 | Chryseobacterium gallinarum | 1324352 | Bacteria | Bacteria | 171 | 9.05e-38 | NTclustered | gi|1830200908|gb|CP050996.1| | 1324352 | g5613 | i0 | 100 | 3.23268698060942 | 92 | 0 | 53 | 0 | 263 | 354 | 1070 | 1161 | Chryseobacterium gallinarum strain FDAARGOS_636 plasmid unnamed2 | blastn | 1167 | 171 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Flavobacteriia | Flavobacteriales | Weeksellaceae | Chryseobacterium | Chryseobacterium gallinarum | |
| 24943122 | 24943122 | PRJNA733995_P_NODE_6940_length_326_cov_1.217391_g6893_i0 | PRJNA733995 | 6940 | 326 | 1.217391 | 3.96869466 | Ignavibacteria bacterium | 2053306 | Bacteria | Bacteria | 54.7 | 0.009 | NTclustered | gi|1858604176|gb|CP054675.1| | 2053306 | g6893 | i0 | 100 | 0.0889570552147239 | 29 | 0 | 9 | 0 | 165 | 193 | 1860936 | 1860908 | Ignavibacteria bacterium isolate Ch128a chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | FCB group | Pseudomonadati | Ignavibacteriota | Ignavibacteria | Ignavibacteria bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;