RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA733995" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 2 ✖

bioproject 1

  • PRJNA733995 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12196001 12196001 PRJNA733995_P_NODE_7510_length_313_cov_4.458333_g7463_i0 PRJNA733995 7510 313 4.458333 13.95458229 uncultured Tolypothrix sp. 442936 Bacteria Bacteria 518 2.4e-142   NTclustered gi|745734112|gb|KM458379.1| 442936 g7463 i0 96.486 190.900958466454 313 11 100 0 1 313 14 326 Uncultured Tolypothrix sp. isolate OTU 00124 23S ribosomal RNA gene, partial sequence blastn 59752 518 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Tolypothrichaceae Tolypothrix uncultured Tolypothrix sp.
17294675 17294675 PRJNA733995_P_NODE_2514_length_567_cov_1.858300_g2467_i0 PRJNA733995 2514 567 1.8583 10.536561 Nostocales cyanobacterium HT-58-2 1940762 Bacteria Bacteria 54.7 0.016   NTclustered gi|1199827411|gb|CP019636.1| 1940762 g2467 i0 94.286 0.0617283950617284 35 2 6 0 102 136 5989534 5989500 Nostocales cyanobacterium HT-58-2 chromosome, complete genome blastn 35 54.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales     Nostocales cyanobacterium HT-58-2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;