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contig_metadata

31 rows where analysis = "blastn", bioproject = "PRJNA728642" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 31 ✖

tax_clade 1

bioproject 1

  • PRJNA728642 · 31 ✖

analysis 1

  • blastn · 31 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
712661 712661 PRJNA728642_P_NODE_10561_length_312_cov_1.288703_g10290_i0 PRJNA728642 10561 312 1.288703 4.02075336 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 481 3.14e-131   NTclustered gi|829162594|ref|XM_001013247.3| 312017 g10290 i0 95.082 16.099358974359 305 15 98 0 1 305 100 404 Tetrahymena thermophila SB210 60S ribosomal protein L23 partial mRNA blastn 5023 481 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
712803 712803 PRJNA728642_P_NODE_17281_length_247_cov_0.885057_g17010_i0 PRJNA728642 17281 247 0.885057 2.18609079 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 337 5.5e-88   NTclustered gi|146163022|ref|XM_001010650.2| 312017 g17010 i0 91.429 0.991902834008097 245 21 99 0 3 247 1236 1480 Tetrahymena thermophila SB210 pyridine-binding domain transketolase partial mRNA blastn 245 337 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
1195083 1195083 PRJNA728642_P_NODE_6221_length_411_cov_2.532544_g5950_i0 PRJNA728642 6221 411 2.532544 10.40875584 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 664 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g5950 i0 96.509 95.1435523114355 401 14 98 0 11 411 417 17 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 39104 664 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
1988839 1988839 PRJNA728642_P_NODE_16482_length_249_cov_0.988636_g16211_i0 PRJNA728642 16482 249 0.988636 2.46170364 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 250 7.4499999999999995e-62   NTclustered gi|229595911|ref|XM_001014258.3| 312017 g16211 i0 84.98 1.69076305220884 253 30 100 8 1 249 55 303 Tetrahymena thermophila SB210 60S ribosomal protein L22, putative partial mRNA blastn 421 250 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
1988903 1988903 PRJNA728642_P_NODE_19582_length_241_cov_0.916667_g19311_i0 PRJNA728642 19582 241 0.916667 2.20916747 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 291 4.22e-74   NTclustered gi|829194196|ref|XM_001025062.3| 312017 g19311 i0 88.382 1 241 28 100 0 1 241 295 55 Tetrahymena thermophila SB210 40S ribosomal protein S24 partial mRNA blastn 241 291 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
4541162 4541162 PRJNA728642_P_NODE_14504_length_264_cov_1.047120_g14233_i0 PRJNA728642 14504 264 1.04712 2.7643968 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 196 1.05e-45   NTclustered gi|229596050|ref|XM_001013456.3| 312017 g14233 i0 82.553 1.14393939393939 235 30 86 6 37 264 220 450 Tetrahymena thermophila SB210 papain family cysteine protease partial mRNA blastn 302 196 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
5023301 5023301 PRJNA728642_P_NODE_3504_length_556_cov_2.434783_g3235_i0 PRJNA728642 3504 556 2.434783 13.53739348 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 1022 0   NTclustered gi|10662|emb|X56170.1| 5894 g3235 i0 99.82 98.8363309352518 556 1 100 0 1 556 580 25 T.canadensis gene for small subunit ribosomal RNA (16S like rRNA) blastn 54953 1027 0.995131450827653 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena canadensis
5816504 5816504 PRJNA728642_P_NODE_18165_length_245_cov_0.895349_g17894_i0 PRJNA728642 18165 245 0.895349 2.19360505 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 285 2.0000000000000002e-72   NTclustered gi|829187930|ref|XM_001030406.3| 312017 g17894 i0 87.755 1 245 28 99 2 2 245 668 425 Tetrahymena thermophila SB210 glutamine synthetase partial mRNA blastn 245 285 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
7091539 7091539 PRJNA728642_P_NODE_16306_length_250_cov_0.870056_g16035_i0 PRJNA728642 16306 250 0.870056 2.17514 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 233 7.529999999999999e-57   NTclustered gi|829164855|ref|XM_971823.2| 312017 g16035 i0 89.617 0.732 183 19 73 0 68 250 1050 868 Tetrahymena thermophila SB210 cytoplasmic and cytosolic malate dehydrogenase family protein partial mRNA blastn 183 233 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
7572905 7572905 PRJNA728642_P_NODE_3586_length_549_cov_3.792017_g3317_i0 PRJNA728642 3586 549 3.792017 20.81817333 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 1009 0   NTclustered gi|1172880852|gb|KY864168.1| 5909 g3317 i0 99.818 100.012750455373 549 1 100 0 1 549 603 1151 Tetrahymena rostrata isolate TR small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 54907 1014 0.995069033530572 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
8366147 8366147 PRJNA728642_P_NODE_19387_length_241_cov_1.845238_g19116_i0 PRJNA728642 19387 241 1.845238 4.44702358 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 285 1.96e-72   NTclustered gi|118385632|ref|XM_001025944.1| 312017 g19116 i0 92.079 0.838174273858921 202 16 84 0 1 202 223 22 Tetrahymena thermophila SB210 receptor of activated kinase C 1A, component of 40S small ribosomal subunit partial mRNA blastn 202 285 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
8848039 8848039 PRJNA728642_P_NODE_20007_length_230_cov_2.044586_g19736_i0 PRJNA728642 20007 230 2.044586 4.7025478 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 420 4.89e-113   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g19736 i0 99.565 97.6869565217391 230 1 100 0 1 230 2087 2316 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 22468 420 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
8848119 8848119 PRJNA728642_P_NODE_5187_length_452_cov_2.868074_g4916_i0 PRJNA728642 5187 452 2.868074 12.96369448 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 830 0   NTclustered gi|1172880852|gb|KY864168.1| 5909 g4916 i0 99.779 99.5818584070797 452 1 100 0 1 452 1268 1719 Tetrahymena rostrata isolate TR small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 45011 835 0.994011976047904 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
9641486 9641486 PRJNA728642_P_NODE_6188_length_412_cov_9.820059_g5917_i0 PRJNA728642 6188 412 9.820059 40.45864308 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 712 0   NTclustered gi|512134943|gb|JX178902.1| 1295638 g5917 i0 97.816 96.9101941747573 412 9 100 0 1 412 1000 1411 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 39927 712 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
9641553 9641553 PRJNA728642_P_NODE_9548_length_329_cov_1.570312_g9277_i0 PRJNA728642 9548 329 1.570312 5.16632648 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 440 5.659999999999997e-119   NTclustered gi|829147375|ref|XM_001010221.3| 312017 g9277 i0 92.038 1.03951367781155 314 23 95 2 1 313 313 1 Tetrahymena thermophila SB210 ribosomal protein L35 partial mRNA blastn 342 440 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
10123658 10123658 PRJNA728642_P_NODE_6448_length_404_cov_1.598187_g6177_i0 PRJNA728642 6448 404 1.598187 6.45667548 root 1 Root_unresolved Root_unresolved 725 0   NTclustered gi|345541658|gb|JN547815.1| 5911 g6177 i0 99.01 86.2029702970297 404 4 100 0 1 404 3401 3804 Tetrahymena thermophila strain ATCC 30382 18S ribosomal RNA gene, partial sequence; and internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S ribosomal RNA gene, complete sequence blastn 34826 725 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
11398846 11398846 PRJNA728642_P_NODE_9209_length_335_cov_1.652672_g8938_i0 PRJNA728642 9209 335 1.652672 5.5364512 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 294 4.750000000000001e-75   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g8938 i0 97.661 57.465671641791 171 4 51 0 1 171 2912 3082 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 19251 294 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
12674678 12674678 PRJNA728642_P_NODE_5990_length_420_cov_1.553314_g5719_i0 PRJNA728642 5990 420 1.553314 6.5239188 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 732 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g5719 i0 98.095 83.0714285714286 420 8 100 0 1 420 1517 1936 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 34890 732 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
12674776 12674776 PRJNA728642_P_NODE_9270_length_334_cov_1.766284_g8999_i0 PRJNA728642 9270 334 1.766284 5.89938856 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 459 1.5899999999999998e-124   NTclustered gi|315570298|tpg|BK007911.1| 5911 g8999 i0 95.47 1.7185628742515 287 13 86 0 44 330 783 497 TPA_exp: Tetrahymena thermophila 40S ribosomal protein rpS4e mRNA, complete cds blastn 574 459 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
14741732 14741732 PRJNA728642_P_NODE_10312_length_316_cov_1.736626_g10041_i0 PRJNA728642 10312 316 1.736626 5.48773816 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 436 6.9899999999999996e-118   NTclustered gi|829197469|ref|XM_001026650.3| 312017 g10041 i0 94.662 0.889240506329114 281 15 89 0 36 316 1 281 Tetrahymena thermophila SB210 40S ribosomal protein S10, putative partial mRNA blastn 281 436 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
14741739 14741739 PRJNA728642_P_NODE_10672_length_310_cov_2.704641_g10401_i0 PRJNA728642 10672 310 2.704641 8.3843871 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 568 2.3299999999999995e-157   NTclustered gi|10782|emb|X54004.1| 5908 g10401 i0 99.677 64.0451612903226 310 1 100 0 1 310 2949 3258 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 19854 568 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
14741818 14741818 PRJNA728642_P_NODE_14692_length_262_cov_1.153439_g14421_i0 PRJNA728642 14692 262 1.153439 3.02201018 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 329 9.859999999999998e-86   NTclustered gi|829189667|ref|XM_001023313.3| 312017 g14421 i0 94.393 0.980916030534351 214 12 82 0 49 262 558 345 Tetrahymena thermophila SB210 ribosomal protein L19 partial mRNA blastn 257 329 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
14741944 14741944 PRJNA728642_P_NODE_2572_length_648_cov_11.205217_g2308_i0 PRJNA728642 2572 648 11.205217 72.60980616 Tetrahymena chironomi 3034767 SAR_Eukaryotes SAR_Eukaryotes 1153 0   NTclustered gi|2459327221|gb|OQ626840.1| 3034767 g2308 i0 98.765 71.0324074074074 648 8 100 0 1 648 1121 474 Tetrahymena chironomi isolate LLH20220320 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 46029 1153 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena chironomi
16015348 16015348 PRJNA728642_P_NODE_17933_length_245_cov_1.186047_g17662_i0 PRJNA728642 17933 245 1.186047 2.90581515 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 239 1.5799999999999998e-58   NTclustered gi|829167175|ref|XM_001014761.4| 312017 g17662 i0 84.426 1.73469387755102 244 36 99 2 3 245 1 243 Tetrahymena thermophila SB210 thioredoxin glutathione reductase partial mRNA blastn 425 239 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
16497773 16497773 PRJNA728642_P_NODE_10733_length_309_cov_2.936441_g10462_i0 PRJNA728642 10733 309 2.936441 9.07360269 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 560 3.88e-155   NTclustered gi|10782|emb|X54004.1| 5908 g10462 i0 99.353 87.7831715210356 309 2 100 0 1 309 1610 1918 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 27125 560 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
17290878 17290878 PRJNA728642_P_NODE_18434_length_244_cov_0.900585_g18163_i0 PRJNA728642 18434 244 0.900585 2.1974274 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 363 8.949999999999999e-96   NTclustered gi|829190977|ref|XM_001032154.2| 312017 g18163 i0 93.443 1 244 16 100 0 1 244 1430 1673 Tetrahymena thermophila SB210 asparaginyl-tRNA synthetase protein partial mRNA blastn 244 363 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
18564737 18564737 PRJNA728642_P_NODE_7855_length_364_cov_2.426117_g7584_i0 PRJNA728642 7855 364 2.426117 8.83106588 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 233 1.15e-56   NTclustered gi|829190052|ref|XM_001032187.3| 312017 g7584 i0 82.353 1 272 45 74 3 14 284 285 16 Tetrahymena thermophila SB210 superoxide dismutase [Cu-Zn] protein partial mRNA blastn 364 233 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
19839795 19839795 PRJNA728642_P_NODE_17356_length_247_cov_0.885057_g17085_i0 PRJNA728642 17356 247 0.885057 2.18609079 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 268 2.04e-67   NTclustered gi|229594146|ref|XM_001029413.2| 312017 g17085 i0 86.29 1.00404858299595 248 32 100 2 1 247 383 137 Tetrahymena thermophila SB210 hypothetical protein partial mRNA blastn 248 268 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
21115389 21115389 PRJNA728642_P_NODE_15837_length_251_cov_0.865169_g15566_i0 PRJNA728642 15837 251 0.865169 2.17157419 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 303 5.69e-78   NTclustered gi|829183327|ref|XM_001020930.3| 312017 g15566 i0 88.446 81.4940239043825 251 29 100 0 1 251 294 44 Tetrahymena thermophila SB210 NADP-dependent isocitrate dehydrogenase partial mRNA blastn 20455 303 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
22872394 22872394 PRJNA728642_P_NODE_13918_length_270_cov_1.172589_g13647_i0 PRJNA728642 13918 270 1.172589 3.1659903 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 377 3.59e-100   NTclustered gi|315570294|tpg|BK007909.1| 5911 g13647 i0 91.852 2.95185185185185 270 22 100 0 1 270 374 105 TPA_exp: Tetrahymena thermophila 40S ribosomal protein rpS2e mRNA, complete cds blastn 797 377 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
24939288 24939288 PRJNA728642_P_NODE_17880_length_245_cov_1.511628_g17609_i0 PRJNA728642 17880 245 1.511628 3.7034886 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 243 1.22e-59   NTclustered gi|829189735|ref|XM_001023376.2| 312017 g17609 i0 84.49 1 245 38 100 0 1 245 155 399 Tetrahymena thermophila SB210 asterix protein, putative partial mRNA blastn 245 243 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;