RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA728642" and tax_phylum = "Abditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Abditibacteriota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA728642 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3264097 3264097 PRJNA728642_P_NODE_15603_length_252_cov_2.150838_g15332_i0 PRJNA728642 15603 252 2.150838 5.42011176 Abditibacteriota bacterium 2783868 Bacteria Bacteria 361 3.34e-95   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g15332 i0 92.913 214.511904761905 254 8 97 5 1 244 2851961 2851708 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 54057 361 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
3264173 3264173 PRJNA728642_P_NODE_19043_length_242_cov_1.473373_g18772_i0 PRJNA728642 19043 242 1.473373 3.56556266 Abditibacteriota bacterium 2783868 Bacteria Bacteria 315 2.52e-81   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g18772 i0 90.244 578.747933884297 246 17 100 6 1 242 2852351 2852593 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 140057 315 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;