RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA728642" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA728642 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
712994 712994 PRJNA728642_P_NODE_9061_length_337_cov_3.901515_g8790_i0 PRJNA728642 9061 337 3.901515 13.14810555 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 534 2.59e-147   NTclustered gi|1958075319|gb|CP064995.1| 2026720 g8790 i0 95.252 77.6854599406528 337 16 100 0 1 337 693960 693624 Candidatus Saccharibacteria bacterium isolate Hjor_18-Q3-R7-51_MAXAC.102_uni chromosome, complete genome blastn 26180 534 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
3264295 3264295 PRJNA728642_P_NODE_7043_length_385_cov_1.480769_g6772_i0 PRJNA728642 7043 385 1.480769 5.70096065 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 392 1.91e-104   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g6772 i0 85.946 43.8285714285714 370 48 95 4 19 385 162079 161711 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 16874 392 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans
18564456 18564456 PRJNA728642_P_NODE_11175_length_303_cov_1.156522_g10904_i0 PRJNA728642 11175 303 1.156522 3.50426166 Candidatus Sumerlaea chitinivorans 2250252 Bacteria Bacteria 303 7.06e-78   NTclustered gi|1419285073|gb|CP030759.1| 2250252 g10904 i0 84.967 430.580858085809 306 39 100 5 1 303 160901 161202 Candidatus Sumerlaea chitinivorans isolate BY40 chromosome, complete genome blastn 130466 303 1 Bacteria Bacteria candidate phyla   Candidatus Sumerlaeota Candidatus Sumerlaeia Candidatus Sumerlaeales Candidatus Sumerlaeaceae Candidatus Sumerlaea Candidatus Sumerlaea chitinivorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;