contig_metadata
5 rows where analysis = "blastn", bioproject = "PRJNA727760" and tax_phylum = "Pseudomonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2470114 | 2470114 | PRJNA727760_S_NODE_1222_length_422_cov_2.601719_g1194_i0 | PRJNA727760 | 1222 | 422 | 2.601719 | 10.97925418 | root | 1 | Root_unresolved | Root_unresolved | 52.8 | 0.041 | NTclustered | gi|959230911|emb|LN899826.1| | 305 | g1194 | i0 | 100 | 0.265402843601896 | 28 | 0 | 7 | 0 | 1 | 28 | 111808 | 111781 | Ralstonia solanacearum genome assembly 9 genomes, chromosome : VIII | blastn | 112 | 52.8 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia solanacearum | ||
| 4541067 | 4541067 | PRJNA727760_S_NODE_324_length_839_cov_2.039164_g307_i0 | PRJNA727760 | 324 | 839 | 2.039164 | 17.10858596 | Klebsiella pneumoniae | 573 | Bacteria | Bacteria | 75 | 1.8e-8 | NTclustered | gi|2523005509|gb|CP040712.1| | 573 | g307 | i0 | 97.727 | 40.0738974970203 | 44 | 0 | 5 | 1 | 795 | 837 | 254341 | 254298 | Klebsiella pneumoniae strain 16HN-35 plasmid p16HN-35_Vir, complete sequence | blastn | 33622 | 75 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 6298852 | 6298852 | PRJNA727760_S_NODE_3345_length_253_cov_1.205556_g3317_i0 | PRJNA727760 | 3345 | 253 | 1.205556 | 3.05005668 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 87.9 | 6.29e-13 | NTclustered | gi|2523005509|gb|CP040712.1| | 573 | g3317 | i0 | 96.296 | 187.03162055336 | 54 | 0 | 21 | 2 | 199 | 251 | 254341 | 254289 | Klebsiella pneumoniae strain 16HN-35 plasmid p16HN-35_Vir, complete sequence | blastn | 47319 | 87.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae | ||
| 7572640 | 7572640 | PRJNA727760_S_NODE_486_length_700_cov_2.622010_g463_i0 | PRJNA727760 | 486 | 700 | 2.62201 | 18.35407 | Bacteria | 2 | Bacteria | Bacteria | 69.4 | 6.94e-7 | NTclustered | gi|959220006|emb|LN899824.1| | 305 | g463 | i0 | 97.5 | 48.1028571428571 | 40 | 1 | 6 | 0 | 658 | 697 | 5780954 | 5780915 | Ralstonia solanacearum genome assembly 9 genomes, chromosome : VI | blastn | 33672 | 69.4 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Betaproteobacteria | Burkholderiales | Burkholderiaceae | Ralstonia | Ralstonia solanacearum | ||
| 10916747 | 10916747 | PRJNA727760_S_NODE_649_length_607_cov_2.209738_g624_i0 | PRJNA727760 | 649 | 607 | 2.209738 | 13.41310966 | Klebsiella pneumoniae | 573 | Bacteria | Bacteria | 87.9 | 1.65e-12 | NTclustered | gi|2523005509|gb|CP040712.1| | 573 | g624 | i0 | 96.296 | 75.7808896210873 | 54 | 0 | 9 | 2 | 2 | 54 | 254289 | 254341 | Klebsiella pneumoniae strain 16HN-35 plasmid p16HN-35_Vir, complete sequence | blastn | 45999 | 87.9 | 1 | Bacteria | Pseudomonadati | Pseudomonadota | Gammaproteobacteria | Enterobacterales | Enterobacteriaceae | Klebsiella | Klebsiella pneumoniae |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;