RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA727760" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA727760 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
712648 712648 PRJNA727760_S_NODE_2721_length_277_cov_1.911765_g2693_i0 PRJNA727760 2721 277 1.911765 5.29558905 Malassezia globosa 76773 Fungi Fungi 496 9.8e-136   NTclustered gi|164656572|ref|XM_001729362.1| 425265 g2693 i0 98.917 1 277 3 100 0 1 277 597 873 Malassezia globosa CBS 7966 uncharacterized protein (MGL_3449), partial mRNA blastn 277 496 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
10916745 10916745 PRJNA727760_S_NODE_2789_length_274_cov_1.164179_g2761_i0 PRJNA727760 2789 274 1.164179 3.18985046 Malassezia restricta 76775 Fungi Fungi 350 7.97e-92   NTclustered gi|1546631199|ref|XM_027627260.1| 76775 g2761 i0 100 48.8284671532847 189 0 69 0 86 274 387 199 Malassezia restricta large subunit ribosomal protein L40e (MRET_0633), partial mRNA blastn 13379 350 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
24939120 24939120 PRJNA727760_S_NODE_2600_length_282_cov_1.492823_g2572_i0 PRJNA727760 2600 282 1.492823 4.20976086 Malassezia globosa 76773 Fungi Fungi 448 2.84e-121   NTclustered gi|164654895|ref|XM_001728534.1| 425265 g2572 i0 95.374 4.49645390070922 281 13 99 0 2 282 618 338 Malassezia globosa CBS 7966 uncharacterized protein (MGL_4275), partial mRNA blastn 1268 448 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;