RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA727760" and tax_phylum = "Ascomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA727760 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1988714 1988714 PRJNA727760_S_NODE_2322_length_297_cov_2.089286_g2294_i0 PRJNA727760 2322 297 2.089286 6.20517942 Purpureocillium lilacinum 33203 Fungi Fungi 544 3.7299999999999996e-150   NTclustered gi|2741354647|ref|XM_065601239.1| 33203 g2294 i0 99.663 1 297 1 100 0 1 297 795 499 Purpureocillium lilacinum uncharacterized protein (PLICBS_007754), partial mRNA blastn 297 544 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Ophiocordycipitaceae Purpureocillium Purpureocillium lilacinum
3263976 3263976 PRJNA727760_S_NODE_1663_length_357_cov_1.373239_g1635_i0 PRJNA727760 1663 357 1.373239 4.90246323 Pseudogymnoascus destructans 655981 Fungi Fungi 108 7.11e-19   NTclustered gi|1370889069|ref|XM_024471176.1| 655981 g1635 i0 82.258 0.34733893557423 124 22 35 0 232 355 799 676 Pseudogymnoascus destructans uncharacterized protein (VC83_07609), mRNA blastn 124 108 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Thelebolales Thelebolaceae Pseudogymnoascus Pseudogymnoascus destructans
5816325 5816325 PRJNA727760_S_NODE_1205_length_425_cov_1.551136_g1177_i0 PRJNA727760 1205 425 1.551136 6.592328 Metarhizium acridum 92637 Fungi Fungi 364 4.629999999999998e-96   NTclustered gi|2749718875|ref|XM_066119671.1| 92637 g1177 i0 98.086 48.9364705882353 209 4 49 0 217 425 1388 1180 Metarhizium acridum translation elongation factor EF-1 alpha (TEF1_1), partial mRNA blastn 20798 364 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Clavicipitaceae Metarhizium Metarhizium acridum
12674369 12674369 PRJNA727760_S_NODE_2270_length_301_cov_1.561404_g2242_i0 PRJNA727760 2270 301 1.561404 4.69982604 Ascomycota 4890 Fungi Fungi 556 4.87e-154   NTclustered gi|1473258532|gb|MH871476.1| 5046 g2242 i0 100 100.013289036545 301 0 100 0 1 301 307 7 Sarocladium strictum culture CBS:376.70M strain CBS 376.70M large subunit ribosomal RNA gene, partial sequence blastn 30104 556 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Sarocladiaceae Sarocladium Sarocladium strictum
14741723 14741723 PRJNA727760_S_NODE_3892_length_235_cov_2.888889_g3864_i0 PRJNA727760 3892 235 2.888889 6.78888915 Diaporthe batatas 748121 Fungi Fungi 139 1.57e-28   NTclustered gi|2124358414|ref|XM_044782441.1| 748121 g3864 i0 100 32.6255319148936 75 0 32 0 1 75 1004 1078 Diaporthe batatas guanine nucleotide-binding protein subunit beta (KVR01_001289), mRNA blastn 7667 139 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Diaporthales Diaporthaceae Diaporthe Diaporthe batatas
16015182 16015182 PRJNA727760_S_NODE_1413_length_388_cov_1.234921_g1385_i0 PRJNA727760 1413 388 1.234921 4.79149348 Colletotrichum destructivum 34406 Fungi Fungi 370 9.01e-98   NTclustered gi|2670800169|ref|XM_062922625.1| 34406 g1385 i0 90.034 61.6520618556701 291 21 75 8 25 315 240 522 Colletotrichum destructivum Putative cytochrome c, class IA/ IB, cytochrome c-like domain superfamily (CDEST_06466), mRNA blastn 23921 370 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Glomerellaceae Colletotrichum Colletotrichum destructivum
25421379 25421379 PRJNA727760_S_NODE_3220_length_257_cov_1.695652_g3192_i0 PRJNA727760 3220 257 1.695652 4.35782564 Pyricularia 48558 Fungi Fungi 132 2.9200000000000003e-26   NTclustered gi|389639323|ref|XM_003717247.1| 242507 g3192 i0 95.181 13.5525291828794 83 4 32 0 1 83 443 525 Pyricularia oryzae 70-15 histone H4 (MGG_06293), mRNA blastn 3483 132 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Magnaporthales Pyriculariaceae Pyricularia Pyricularia oryzae

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;