RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA725806" and tax_phylum = "Platyhelminthes"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 17 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA725806 · 17 ✖

analysis 1

  • blastn · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1194475 1194475 PRJNA725806_P_NODE_63941_length_230_cov_3.487047_g63643_i0 PRJNA725806 63941 230 3.487047 8.0202081 Metazoa 33208 Platyhelminthes Platyhelminthes 56.5 0.002   NTclustered gi|1084296808|ref|XM_018799744.1| 6183 g63643 i0 100 8.38260869565217 30 0 13 0 199 228 303 332 Schistosoma mansoni hypothetical protein partial mRNA blastn 1928 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
1987792 1987792 PRJNA725806_P_NODE_137602_length_174_cov_9.751825_g137300_i0 PRJNA725806 137602 174 9.751825 16.9681755 Dugesia japonica 6161 Platyhelminthes Platyhelminthes 56.5 0.001   NTclustered gi|393794534|dbj|AK388958.1| 6161 g137300 i0 94.595 0.21264367816092 37 1 21 1 106 141 999 1035 Dugesia japonica cDNA, clone: Dj_aH_000_05268HH.full, full-insert sequence, expressed in adult head blastn 37 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Dugesia Dugesia japonica
1987933 1987933 PRJNA725806_P_NODE_48702_length_250_cov_9.676056_g48405_i0 PRJNA725806 48702 250 9.676056 24.19014 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.023   NTclustered gi|687180857|emb|LN128286.1| 99802 g48405 i0 100 0.112 28 0 11 0 79 106 1453 1480 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0118897 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
4540303 4540303 PRJNA725806_P_NODE_4364_length_456_cov_6.274463_g4091_i0 PRJNA725806 4364 456 6.274463 28.61155128 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.044   NTclustered gi|687186282|emb|LN161081.1| 99802 g4091 i0 100 0.12280701754386 28 0 6 0 329 356 1652 1679 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0144436 blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
5815325 5815325 PRJNA725806_P_NODE_122685_length_182_cov_13.255172_g122383_i0 PRJNA725806 122685 182 13.255172 24.12441304 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.015   NTclustered gi|690567416|emb|LN121433.1| 99802 g122383 i0 100 0.153846153846154 28 0 15 0 147 174 1122 1095 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0008224 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
5815448 5815448 PRJNA725806_P_NODE_21065_length_313_cov_10.119565_g20769_i0 PRJNA725806 21065 313 10.119565 31.67423845 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.029   NTclustered gi|690456599|emb|LN001124.1| 99802 g20769 i0 100 0.0894568690095847 28 0 9 0 282 309 18862 18835 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0001114 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
5815502 5815502 PRJNA725806_P_NODE_42405_length_261_cov_2.022321_g42108_i0 PRJNA725806 42405 261 2.022321 5.27825781 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 52.8 0.024   NTclustered gi|687398267|emb|LK718586.1| 57078 g42108 i0 100 0.10727969348659 28 0 11 0 7 34 634 607 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0292937 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
7090701 7090701 PRJNA725806_P_NODE_6106_length_422_cov_3.415584_g5823_i0 PRJNA725806 6106 422 3.415584 14.41376448 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.041   NTclustered gi|690507929|emb|LN057301.1| 99802 g5823 i0 100 0.0663507109004739 28 0 7 0 68 95 2800 2827 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0055598 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
8847555 8847555 PRJNA725806_P_NODE_79407_length_214_cov_2.429379_g79106_i0 PRJNA725806 79407 214 2.429379 5.19887106 root 1 Root_unresolved Root_unresolved 52.8 0.019   NTclustered gi|687757281|emb|LK417269.1| 57078 g79106 i0 100 0.261682242990654 28 0 13 0 130 157 922 949 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0023464 blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
10915796 10915796 PRJNA725806_P_NODE_119969_length_184_cov_3.816327_g119667_i0 PRJNA725806 119969 184 3.816327 7.02204168 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 54.7 0.004   NTclustered gi|687162359|emb|LN034991.1| 99802 g119667 i0 100 0.157608695652174 29 0 16 0 58 86 696 668 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0034248 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
10915831 10915831 PRJNA725806_P_NODE_139709_length_173_cov_8.375000_g139407_i0 PRJNA725806 139709 173 8.375 14.48875 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 54.7 0.004   NTclustered gi|690515232|emb|LN065822.1| 99802 g139407 i0 96.875 0.184971098265896 32 1 18 0 116 147 645 676 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0063622 blastn 32 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
13948414 13948414 PRJNA725806_P_NODE_94191_length_201_cov_7.914634_g93889_i0 PRJNA725806 94191 201 7.914634 15.90841434 Metazoa 33208 Platyhelminthes Platyhelminthes 52.8 0.017   NTclustered gi|690531946|emb|LN082836.1| 99802 g93889 i0 100 0.417910447761194 28 0 14 0 14 41 2685 2712 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0079320 blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
18563667 18563667 PRJNA725806_P_NODE_45095_length_256_cov_6.534247_g44798_i0 PRJNA725806 45095 256 6.534247 16.72767232 Schistosoma haematobium 6185 Platyhelminthes Platyhelminthes 52.8 0.023   NTclustered gi|2318768089|ref|XM_051219304.1| 6185 g44798 i0 100 0.109375 28 0 11 0 202 229 1707 1734 Schistosoma haematobium ELAV-like protein 4 (ELAVL4), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
20320902 20320902 PRJNA725806_P_NODE_40276_length_264_cov_11.541850_g39979_i0 PRJNA725806 40276 264 11.54185 30.470484 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 52.8 0.024   NTclustered gi|1084310361|ref|XM_018790409.1| 6183 g39979 i0 100 0.53030303030303 28 0 11 0 104 131 2074 2101 Schistosoma mansoni kelch-like protein partial mRNA blastn 140 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni
21114262 21114262 PRJNA725806_P_NODE_105597_length_193_cov_5.346154_g105295_i0 PRJNA725806 105597 193 5.346154 10.31807722 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 62.1 2.76e-5   NTclustered gi|687490580|emb|LK668625.1| 57078 g105295 i0 100 0.766839378238342 33 0 17 0 58 90 22 54 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0248645 blastn 148 62.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
23664773 23664773 PRJNA725806_P_NODE_132759_length_177_cov_3.221429_g132457_i0 PRJNA725806 132759 177 3.221429 5.70192933 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 56.5 0.001   NTclustered gi|690605916|emb|LN160386.1| 99802 g132457 i0 100 0.169491525423729 30 0 17 0 32 61 99 128 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0143943 blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
23664812 23664812 PRJNA725806_P_NODE_156199_length_166_cov_1.364341_g155897_i0 PRJNA725806 156199 166 1.364341 2.26480606 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.014   NTclustered gi|690660942|emb|LN210380.1| 99802 g155897 i0 100 0.168674698795181 28 0 17 0 67 94 12 39 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0176483 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;