RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA725806" and tax_kingdom = "Bamfordvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 7 ✖

bioproject 1

  • PRJNA725806 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4540149 4540149 PRJNA725806_P_NODE_141104_length_173_cov_1.757353_g140802_i0 PRJNA725806 141104 173 1.757353 3.04022069 Adintovirus androctonus13035 3115887 Viruses Viruses 270 3.69e-68   NTclustered gi|2710390252|tpg|BK066392.1| 3115887 g140802 i0 94.798 1 173 9 100 0 1 173 2720 2892 MAG TPA_asm: Adintovirus androctonus13035 isolate Adinto13035 genomic sequence blastn 173 270 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus androctonus13035
5815632 5815632 PRJNA725806_P_NODE_97285_length_199_cov_4.104938_g96983_i0 PRJNA725806 97285 199 4.104938 8.16882662 Mimivirus U306 1932880 Viruses Viruses 52.8 0.017   NTclustered gi|1572561086|emb|LT717347.1| 1932880 g96983 i0 100 0.14070351758794 28 0 14 0 115 142 623723 623696 Mimivirus U306 genome assembly, complete genome: monopartite blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Mimiviridae Mimivirus Mimivirus U306
8847477 8847477 PRJNA725806_P_NODE_30207_length_286_cov_6.843373_g29910_i0 PRJNA725806 30207 286 6.843373 19.57204678 Iridoviridae 10486 Viruses Viruses 52.8 0.026   NTclustered gi|1241380616|gb|MF197913.1| 2035708 g29910 i0 100 0.685314685314685 28 0 10 0 186 213 134406 134433 Cherax quadricarinatus iridovirus strain CQIV-CN01, complete genome blastn 196 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae Decapodiridovirus Decapodiridovirus litopenaeus1
9640341 9640341 PRJNA725806_P_NODE_175048_length_158_cov_1.239669_g174746_i0 PRJNA725806 175048 158 1.239669 1.95867702 Oceanusvirus kaneohense 3060432 Viruses Viruses 58.4 2.81e-4   NTclustered gi|2500360013|ref|NC_075136.1| 2060617 g174746 i0 81.333 12.4303797468354 75 11 47 3 50 123 49130 49202 Tetraselmis virus 1, complete genome blastn 1964 58.4 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Imitervirales Allomimiviridae Oceanusvirus Oceanusvirus kaneohense
12191226 12191226 PRJNA725806_P_NODE_34690_length_276_cov_4.079498_g34393_i0 PRJNA725806 34690 276 4.079498 11.25941448 Adintovirus androctonus13035 3115887 Viruses Viruses 182 3.1e-41   NTclustered gi|2710390252|tpg|BK066392.1| 3115887 g34393 i0 88.125 0.579710144927536 160 9 58 2 23 182 2510 2361 MAG TPA_asm: Adintovirus androctonus13035 isolate Adinto13035 genomic sequence blastn 160 182 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus androctonus13035
13465713 13465713 PRJNA725806_P_NODE_63631_length_230_cov_7.217617_g63333_i0 PRJNA725806 63631 230 7.217617 16.6005191 Androctonus mauritanicus toursvirus 3394651 Viruses Viruses 80.5 9.42e-11   NTclustered gi|2893384087|gb|PQ778496.1| 3394651 g63333 i0 78.125 0.556521739130435 128 26 55 2 72 198 23189 23063 Androctonus mauritanicus toursvirus, complete genome blastn 128 80.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Ascoviridae Toursvirus Androctonus mauritanicus toursvirus
16014243 16014243 PRJNA725806_P_NODE_133153_length_177_cov_2.050000_g132851_i0 PRJNA725806 133153 177 2.05 3.6285 Iridovirus LCIVAC01 2506607 Viruses Viruses 52.8 0.015   NTclustered gi|1588058645|gb|MK500315.1| 2506607 g132851 i0 100 0.15819209039548 28 0 16 0 132 159 603 630 MAG: Iridovirus LCIVAC01 genomic sequence, sequence blastn 28 52.8 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Iridoviridae   Iridovirus LCIVAC01

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;