RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA725806" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA725806 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8365141 8365141 PRJNA725806_P_NODE_192247_length_151_cov_3.026316_g191945_i0 PRJNA725806 192247 151 3.026316 4.56973716 Candidatus Phycocordibacter aenigmaticus 1948796 Bacteria Bacteria 52.8 0.012   NTclustered gi|2862534145|gb|CP174359.1| 1948796 g191945 i0 100 0.185430463576159 28 0 19 0 106 133 338988 339015 MAG: Patescibacteria group bacterium UBA2163 chromosome, complete genome blastn 28 52.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota Minisyncoccia Candidatus Phycocordibacterales Candidatus Phycocordibacteraceae Candidatus Phycocordibacter Candidatus Phycocordibacter aenigmaticus
8365236 8365236 PRJNA725806_P_NODE_59327_length_236_cov_1.216080_g59030_i0 PRJNA725806 59327 236 1.21608 2.8699488 Candidatus Nealsonbacteria bacterium DGGOD1a 3043262 Bacteria Bacteria 52.8 0.021   NTclustered gi|2205901313|gb|CP092821.1| 3043262 g59030 i0 100 0.11864406779661 28 0 12 0 88 115 492038 492065 MAG: Candidatus Nealsonbacteria bacterium DGGOD1a chromosome, complete genome blastn 28 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Nealsoniibacteriota         Candidatus Nealsonbacteria bacterium DGGOD1a
11398116 11398116 PRJNA725806_P_NODE_54449_length_242_cov_3.741463_g54152_i0 PRJNA725806 54449 242 3.741463 9.05434046 root 1 Root_unresolved Root_unresolved 54.7 0.006   NTclustered gi|2314743697|dbj|AP026679.1| 2099670 g54152 i0 100 0.239669421487603 29 0 12 0 98 126 262706 262678 MAG: Candidatus Dojkabacteria bacterium KatS3mg084 DNA, complete genome blastn 58 54.7 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
23664771 23664771 PRJNA725806_P_NODE_13179_length_351_cov_6.216561_g12889_i0 PRJNA725806 13179 351 6.216561 21.82012911 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 52.8 0.033   NTclustered gi|2108435138|gb|CP070627.1| 2052149 g12889 i0 100 0.0797720797720798 28 0 8 0 94 121 2876108 2876135 MAG: Candidatus Aminicenantes bacterium isolate bin99 chromosome blastn 28 52.8 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;