RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA724039" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA724039 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3745979 3745979 PRJNA724039_S_NODE_9203_length_215_cov_3.376404_g8996_i0 PRJNA724039 9203 215 3.376404 7.2592686 Smittium 4888 Fungi Fungi 80.5 8.7e-11   NTclustered gi|397529728|gb|JQ302913.1| 133382 g8996 i0 92.727 22.6372093023256 55 4 26 0 161 215 1046 1100 Smittium morbosum note PCR amp code:70-97 28S ribosomal RNA gene, partial sequence blastn 4867 80.5 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Legeriomycetaceae Smittium Smittium morbosum
17289124 17289124 PRJNA724039_S_NODE_15154_length_164_cov_1.590551_g14947_i0 PRJNA724039 15154 164 1.590551 2.60850364 Basidiobolus ranarum 34480 Fungi Fungi 111 2.23e-20   NTclustered gi|358030849|dbj|AB609158.1| 34480 g14947 i0 80.392 2.6219512195122 153 24 91 6 2 151 1090 1239 Basidiobolus ranarum EF2 gene for translation elongation factor 2, partial cds, strain: NRRL 34594 blastn 430 111 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus ranarum
21113746 21113746 PRJNA724039_S_NODE_3297_length_401_cov_9.170330_g3090_i0 PRJNA724039 3297 401 9.17033 36.7730233 Zoophagus pectosporus 2082958 Fungi Fungi 126 2.23e-24   NTclustered gi|2130025291|gb|OL396565.1| 2082958 g3090 i0 83.704 27.6084788029925 135 21 33 1 96 229 335 201 Zoophagus pectosporus isolate B39 large subunit ribosomal RNA gene, partial sequence blastn 11071 126 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Zoopagaceae Zoophagus Zoophagus pectosporus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;