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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA724039" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA724039 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3262479 3262479 PRJNA724039_S_NODE_3043_length_419_cov_4.164921_g2836_i0 PRJNA724039 3043 419 4.164921 17.45101899 Didymium comatum 289977 Evosea other_Eukaryota 318 3.6e-82   NTclustered gi|2329703346|gb|MW240052.1| 289977 g2836 i0 83.918 77.3102625298329 342 45 80 8 1 337 372 36 Didymium comatum strain MA-Fungi 34607 elongation factor 1-alpha (EF1a) gene, partial cds blastn 32393 318 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium comatum
4539524 4539524 PRJNA724039_S_NODE_18044_length_150_cov_2.646018_g17837_i0 PRJNA724039 18044 150 2.646018 3.969027 Cavenderia fasciculata 261658 Evosea other_Eukaryota 217 4.089999999999999e-52   NTclustered gi|470237391|ref|XM_004350602.1| 261658 g17837 i0 92.667 99.1266666666667 150 11 100 0 1 150 388 239 Cavenderia fasciculata actin (DFA_11706), partial mRNA blastn 14869 217 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
5814880 5814880 PRJNA724039_S_NODE_9505_length_211_cov_5.770115_g9298_i0 PRJNA724039 9505 211 5.770115 12.17494265 Soliformovum expulsum 435423 Evosea other_Eukaryota 268 1.6899999999999994e-67   NTclustered gi|260909293|gb|FJ766479.1| 435423 g9298 i0 89.623 89.2559241706161 212 21 100 1 1 211 848 1059 Soliformovum expulsum culture-collection ATCC:48083 clone pool B 18S ribosomal RNA gene, partial sequence blastn 18833 268 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Soliformoviidae Soliformovum Soliformovum expulsum
10915183 10915183 PRJNA724039_S_NODE_16069_length_159_cov_1.622951_g15862_i0 PRJNA724039 16069 159 1.622951 2.58049209 uncultured Soliformovum 2510342 Evosea other_Eukaryota 267 4.3199999999999996e-67   NTclustered gi|1564356923|gb|MK443523.1| 2510342 g15862 i0 96.855 1.50943396226415 159 5 100 0 1 159 281 123 Uncultured Soliformovum clone OTUA345 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 240 267 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae   uncultured Soliformovum
13948006 13948006 PRJNA724039_S_NODE_17431_length_153_cov_1.336207_g17224_i0 PRJNA724039 17431 153 1.336207 2.04439671 Eumycetozoa 142796 Evosea other_Eukaryota 132 1.5600000000000002e-26   NTclustered gi|2172335772|gb|MW701625.1| 2816237 g17224 i0 82.781 24.2222222222222 151 22 97 4 1 149 650 502 Badhamia lilacina voucher LE317581 translation elongation factor EF-1 alpha (EF1A) gene, partial cds blastn 3706 132 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Badhamia Badhamia lilacina
14740142 14740142 PRJNA724039_S_NODE_13432_length_175_cov_1.123188_g13225_i0 PRJNA724039 13432 175 1.123188 1.965579 Filamoeba sinensis 308476 Evosea other_Eukaryota 169 1.4e-37   NTclustered gi|146448851|gb|EF513193.1| 308476 g13225 i0 84.706 10.0742857142857 170 24 97 2 4 172 1334 1166 Filamoeba sinensis elongation factor 1A (EF1A) gene, partial cds blastn 1763 169 1 Eukaryota Amoebozoa   Evosea Variosea     Filamoeba Filamoeba sinensis
16013742 16013742 PRJNA724039_S_NODE_5333_length_301_cov_5.106061_g5126_i0 PRJNA724039 5333 301 5.106061 15.36924361 Protostelium sp. 4638 1215677 Evosea other_Eukaryota 462 1.09e-125   NTclustered gi|399764201|gb|JQ271712.1| 1215677 g5126 i0 94.684 49.3687707641196 301 11 100 2 1 301 339 44 Protostelium sp. 4638 18S ribosomal RNA gene, partial sequence blastn 14860 462 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae Protostelium Protostelium sp. 4638
19046015 19046015 PRJNA724039_S_NODE_9955_length_206_cov_3.325444_g9748_i0 PRJNA724039 9955 206 3.325444 6.85041464 Flamella 490353 Evosea other_Eukaryota 381 2.0199999999999994e-101   NTclustered gi|163943979|gb|EU186023.1| 490516 g9748 i0 100 98.7718446601942 206 0 100 0 1 206 982 777 Flamella balnearia 18S ribosomal RNA gene, partial sequence blastn 20347 381 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella balnearia
19838158 19838158 PRJNA724039_S_NODE_5436_length_298_cov_7.019157_g5229_i0 PRJNA724039 5436 298 7.019157 20.91708786 Heterostelium pallidum 13642 Evosea other_Eukaryota 198 3.3599999999999993e-46   NTclustered gi|160688721|gb|EU275726.1| 13642 g5229 i0 81.048 66.3087248322148 248 47 83 0 6 253 9345 9098 Polysphondylium pallidum strain PN500 mitochondrion, complete genome blastn 19760 198 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium pallidum
22388545 22388545 PRJNA724039_S_NODE_17458_length_153_cov_1.189655_g17251_i0 PRJNA724039 17458 153 1.189655 1.82017215 Cavenderia fasciculata 261658 Evosea other_Eukaryota 60.2 7.49e-5   NTclustered gi|470237789|ref|XM_004350801.1| 261658 g17251 i0 94.737 0.248366013071895 38 2 25 0 97 134 53 16 Cavenderia fasciculata 40S ribosomal protein S25 (rps25), partial mRNA blastn 38 60.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
22388649 22388649 PRJNA724039_S_NODE_6378_length_269_cov_18.857759_g6171_i0 PRJNA724039 6378 269 18.857759 50.72737171 Heterostelium pallidum 13642 Evosea other_Eukaryota 89.8 1.88e-13   NTclustered gi|160688721|gb|EU275726.1| 13642 g6171 i0 81.416 63.5613382899628 113 18 41 3 4 114 21962 21851 Polysphondylium pallidum strain PN500 mitochondrion, complete genome blastn 17098 89.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium pallidum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;