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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA724039" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 15 ✖

tax_clade 1

bioproject 1

  • PRJNA724039 · 15 ✖

analysis 1

  • blastn · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4539592 4539592 PRJNA724039_S_NODE_4884_length_317_cov_4.489286_g4677_i0 PRJNA724039 4884 317 4.489286 14.23103662 Paramoeba branchiphila 308475 Discosea other_Eukaryota 224 5.949999999999999e-54   NTclustered gi|226347442|gb|FJ807261.1| 308475 g4677 i0 79.495 67.7097791798107 317 63 99 2 1 316 548 233 Neoparamoeba branchiphila strain AMOP1 elongation factor 1 alpha gene, partial cds blastn 21464 224 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba branchiphila
5814632 5814632 PRJNA724039_S_NODE_12185_length_184_cov_2.231293_g11978_i0 PRJNA724039 12185 184 2.231293 4.10557912 Sappinia pedata 472956 Discosea other_Eukaryota 243 8.67e-60   NTclustered gi|157673542|gb|EU004601.1| 472956 g11978 i0 90.659 81.2445652173913 182 17 99 0 1 182 437 618 Sappinia pedata strain NZ05-11L-1 actin gene, partial cds blastn 14949 243 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Sappinia Sappinia pedata
9639669 9639669 PRJNA724039_S_NODE_3068_length_417_cov_13.926316_g2861_i0 PRJNA724039 3068 417 13.926316 58.07273772 Planopodium haveli 2773112 Discosea other_Eukaryota 765 0   NTclustered gi|1914009729|gb|MT975619.1| 2773112 g2861 i0 99.76 48.484412470024 417 1 100 0 1 417 419 3 Planopodium haveli clone 1 18S ribosomal RNA gene, complete sequence blastn 20218 765 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Planopodium Planopodium haveli
10122632 10122632 PRJNA724039_S_NODE_12268_length_183_cov_4.369863_g12061_i0 PRJNA724039 12268 183 4.369863 7.99684929 Cochliopodium 313557 Discosea other_Eukaryota 244 2.4e-60   NTclustered gi|59876024|gb|AY785057.1| 313998 g12061 i0 97.887 6.13661202185792 142 1 77 2 44 183 328 469 Cochliopodium sp. strain Kiel 18S ribosomal RNA gene, partial sequence blastn 1123 244 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium sp. strain Kiel
15222752 15222752 PRJNA724039_S_NODE_3612_length_379_cov_7.350877_g3405_i0 PRJNA724039 3612 379 7.350877 27.85982383 Ripella 1217112 Discosea other_Eukaryota 612 1.3199999999999999e-170   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g3405 i0 95.812 101.554089709763 382 10 100 6 1 379 27 405 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 38489 616 0.993506493506494 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
17289184 17289184 PRJNA724039_S_NODE_2414_length_481_cov_10.707207_g2213_i0 PRJNA724039 2414 481 10.707207 51.50166567 Paravannella minima 1443144 Discosea other_Eukaryota 204 1.22e-47   NTclustered gi|1583105587|ref|NC_040955.1| 1443144 g2213 i0 76.842 48.7214137214137 380 77 78 10 3 375 50231 49856 Paravannella minima mitochondrion, complete genome blastn 23435 204 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
18562872 18562872 PRJNA724039_S_NODE_16255_length_158_cov_1.561983_g16048_i0 PRJNA724039 16255 158 1.561983 2.46793314 Vannella septentrionalis 197531 Discosea other_Eukaryota 267 4.2799999999999996e-67   NTclustered gi|300078499|gb|GU001161.1| 197531 g16048 i0 96.894 50.0443037974684 161 2 100 1 1 158 2722 2562 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7907 267 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
18562873 18562873 PRJNA724039_S_NODE_16335_length_157_cov_13.375000_g16128_i0 PRJNA724039 16335 157 13.375 20.99875 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 159 7.419999999999998e-35   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g16128 i0 85.207 157.668789808917 169 9 97 5 2 154 33257 33425 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 24754 159 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
19838164 19838164 PRJNA724039_S_NODE_5716_length_289_cov_4.519841_g5509_i0 PRJNA724039 5716 289 4.519841 13.06234049 Cochliopodium kieliense 1512276 Discosea other_Eukaryota 440 4.889999999999998e-119   NTclustered gi|659103923|gb|KJ569725.1| 1512276 g5509 i0 94.218 33.8442906574394 294 7 100 7 1 289 306 18 Cochliopodium kieliense clone 9601 18S ribosomal RNA gene, partial sequence blastn 9781 440 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Cochliopodium Cochliopodium kieliense
19838227 19838227 PRJNA724039_S_NODE_9696_length_209_cov_3.726744_g9489_i0 PRJNA724039 9696 209 3.726744 7.78889496 Paravannella minima 1443144 Discosea other_Eukaryota 108 3.86e-19   NTclustered gi|1583105587|ref|NC_040955.1| 1443144 g9489 i0 78.916 4.57894736842105 166 29 78 5 47 209 2858 2696 Paravannella minima mitochondrion, complete genome blastn 957 108 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
20320550 20320550 PRJNA724039_S_NODE_11016_length_194_cov_3.019108_g10809_i0 PRJNA724039 11016 194 3.019108 5.85706952 Vannella 95228 Discosea other_Eukaryota 353 4.1e-93   NTclustered gi|62865936|gb|AY929911.1| 325074 g10809 i0 99.485 96.1752577319588 194 1 100 0 1 194 1033 840 Vannella sp. strain 4354/I 18S small subunit ribosomal RNA gene, partial sequence blastn 18658 353 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp. strain 4354/I
21113793 21113793 PRJNA724039_S_NODE_5397_length_299_cov_63.255725_g5190_i0 PRJNA724039 5397 299 63.255725 189.13461775 Planopodium desertum 2773111 Discosea other_Eukaryota 542 1.35e-149   NTclustered gi|330902849|gb|JF298243.1| 2773111 g5190 i0 99.331 45.0735785953177 299 2 100 0 1 299 1038 740 Ovalopodium desertum clone 3701 18S ribosomal RNA gene, partial sequence blastn 13477 542 1 Eukaryota Amoebozoa   Discosea   Himatismenida Cochliopodiidae Planopodium Planopodium desertum
23664134 23664134 PRJNA724039_S_NODE_13739_length_172_cov_5.118519_g13532_i0 PRJNA724039 13739 172 5.118519 8.80385268 Paramoeba pemaquidensis 180228 Discosea other_Eukaryota 174 2.95e-39   NTclustered gi|1079488025|ref|NC_031417.1| 180228 g13532 i0 85.143 26.4476744186047 175 21 100 4 1 172 32268 32440 Paramoeba pemaquidensis culture-collection CCAP:1560/4 mitochondrion, complete genome blastn 4549 174 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba pemaquidensis
23664285 23664285 PRJNA724039_S_NODE_7019_length_254_cov_9.995392_g6812_i0 PRJNA724039 7019 254 9.995392 25.38829568 Paramoeba aparasomata 2583407 Discosea other_Eukaryota 326 1.23e-84   NTclustered gi|1767098935|gb|MK518072.1| 2583407 g6812 i0 89.883 71.9370078740157 257 21 99 4 2 254 15482 15227 Paramoeba aparasomata mitochondrion, complete genome blastn 18272 326 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba aparasomata
24937681 24937681 PRJNA724039_S_NODE_300_length_1926_cov_122.605082_g250_i0 PRJNA724039 300 1926 122.605082 2361.37387932 Vannella septentrionalis 197531 Discosea other_Eukaryota 285 1.8e-71   NTclustered gi|300078499|gb|GU001161.1| 197531 g250 i0 77.689 20.5711318795431 502 88 26 21 1 497 2248 1766 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 39620 285 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;