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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA724011" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 9 ✖

tax_phylum 1

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA724011 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3261917 3261917 PRJNA724011_P_NODE_41763_length_410_cov_1.362018_g40740_i0 PRJNA724011 41763 410 1.362018 5.5842738 Halobaculum litoreum 3031998 Archaea Archaea 67.6 1.41e-6   NTclustered gi|2511735787|gb|CP126156.1| 3031998 g40740 i0 97.436 33.3487804878049 39 1 10 0 315 353 318584 318546 Halobaculum litoreum strain DT92 chromosome, complete genome blastn 13673 67.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halobaculum Halobaculum litoreum
4539018 4539018 PRJNA724011_P_NODE_41204_length_413_cov_2.308824_g40181_i0 PRJNA724011 41204 413 2.308824 9.53544312 Halomicrobium salinisoli 2878391 Archaea Archaea 52.8 0.04   NTclustered gi|2110956525|gb|CP084463.1| 2878391 g40181 i0 100 0.135593220338983 28 0 7 0 232 259 377897 377870 Halomicrobium salinisoli strain LT50 chromosome, complete genome blastn 56 52.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halomicrobium Halomicrobium salinisoli
8364202 8364202 PRJNA724011_P_NODE_83387_length_270_cov_1.949239_g82364_i0 PRJNA724011 83387 270 1.949239 5.2629453 Natronomonas halophila 2747817 Archaea Archaea 56.5 0.002   NTclustered gi|1865516082|gb|CP058334.1| 2747817 g82364 i0 100 0.111111111111111 30 0 11 0 195 224 1441961 1441932 Natronomonas halophila strain C90 chromosome, complete genome blastn 30 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas halophila
10914360 10914360 PRJNA724011_P_NODE_101549_length_246_cov_0.890173_g100526_i0 PRJNA724011 101549 246 0.890173 2.18982558 Natronococcus zhouii 2951804 Archaea Archaea 54.7 0.006   NTclustered gi|2259612910|gb|CP099391.1| 2951804 g100526 i0 89.13 2.82113821138211 46 2 19 2 39 84 3709828 3709870 Natronococcus zhouii strain CG52 chromosome, complete genome blastn 694 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronococcus Natronococcus zhouii
17288472 17288472 PRJNA724011_P_NODE_13594_length_834_cov_5.293035_g12672_i0 PRJNA724011 13594 834 5.293035 44.1439119 Methanosphaerula palustris 475088 Archaea Archaea 58.4 0.002   NTclustered gi|219544946|gb|CP001338.1| 521011 g12672 i0 97.059 0.0407673860911271 34 1 4 0 21 54 936161 936128 Methanosphaerula palustris E1-9c chromosome, complete genome blastn 34 58.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanoregulaceae Methanosphaerula Methanosphaerula palustris
20320314 20320314 PRJNA724011_P_NODE_43316_length_400_cov_1.902141_g42293_i0 PRJNA724011 43316 400 1.902141 7.608564 root 1 Root_unresolved Root_unresolved 54.7 0.011   NTclustered gi|966204314|emb|LN831302.1| 1407499 g42293 i0 96.97 0.2275 33 0 8 1 237 268 636940 636972 Halobacterium hubeiense strain JI20-1 genome assembly, chromosome: I blastn 91 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium hubeiense
21113007 21113007 PRJNA724011_P_NODE_11217_length_933_cov_2.641860_g10363_i0 PRJNA724011 11217 933 2.64186 24.6485538 Halovivax ruber 387341 Archaea Archaea 54.7 0.026   NTclustered gi|433288832|gb|CP003050.1| 797302 g10363 i0 96.875 0.0342979635584137 32 1 3 0 9 40 1756339 1756308 Halovivax ruber XH-70, complete genome blastn 32 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Halovivax Halovivax ruber
21113224 21113224 PRJNA724011_P_NODE_43857_length_397_cov_1.648148_g42834_i0 PRJNA724011 43857 397 1.648148 6.54314756 Halosimplex litoreum 1198301 Archaea Archaea 54.7 0.011   NTclustered gi|1943741857|gb|CP065856.1| 1198301 g42834 i0 100 0.0730478589420655 29 0 7 0 111 139 769907 769935 Halosimplex litoreum strain YGH94 chromosome, complete genome blastn 29 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halosimplex Halosimplex litoreum
23663648 23663648 PRJNA724011_P_NODE_40239_length_420_cov_1.331412_g39216_i0 PRJNA724011 40239 420 1.331412 5.5919304 Natronomonas salina 1710540 Archaea Archaea 54.7 0.011   NTclustered gi|1865519430|gb|CP058335.1| 1710540 g39216 i0 100 0.0690476190476191 29 0 7 0 129 157 1970501 1970473 Natronomonas salina strain YPL13 chromosome, complete genome blastn 29 54.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas salina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;