RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA724011" and tax_phylum = "Priapulida"

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tax_superkingdom 1

tax_phylum 1

  • Priapulida · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA724011 · 1 ✖

analysis 1

  • blastn · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5022317 5022317 PRJNA724011_P_NODE_87684_length_262_cov_1.375661_g86661_i0 PRJNA724011 87684 262 1.375661 3.60423182 Opisthokonta 33154 Priapulida other_Eukaryota 52.8 0.024   NTclustered gi|957859991|ref|XR_001395260.1| 37621 g86661 i0 96.774 0.343511450381679 31 1 12 0 65 95 139 109 PREDICTED: Priapulus caudatus uncharacterized LOC106818617 (LOC106818617), transcript variant X1, ncRNA blastn 90 52.8 1 Eukaryota Opisthokonta Metazoa Priapulida Priapulimorpha Priapulimorphida Priapulidae Priapulus Priapulus caudatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;