RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA724011" and tax_phylum = "Placozoa"

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tax_superkingdom 1

tax_phylum 1

  • Placozoa · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA724011 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12189968 12189968 PRJNA724011_P_NODE_46250_length_384_cov_1.803859_g45227_i0 PRJNA724011 46250 384 1.803859 6.92681856 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 333 1.17e-86   NTclustered gi|196016941|ref|XM_002118284.1| 10228 g45227 i0 83.807 187.221354166667 352 55 91 2 29 379 228 578 Trichoplax adhaerens uncharacterized protein (TRIADDRAFT_64418), partial mRNA blastn 71893 333 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens
24936872 24936872 PRJNA724011_P_NODE_103960_length_244_cov_2.111111_g102937_i0 PRJNA724011 103960 244 2.111111 5.15111084 Trichoplax adhaerens 10228 Placozoa other_Eukaryota 237 5.6600000000000005e-58   NTclustered gi|196016941|ref|XM_002118284.1| 10228 g102937 i0 84.362 202.188524590164 243 36 99 2 1 242 881 640 Trichoplax adhaerens uncharacterized protein (TRIADDRAFT_64418), partial mRNA blastn 49334 237 1 Eukaryota Opisthokonta Metazoa Placozoa Uniplacotomia Trichoplacea Trichoplacidae Trichoplax Trichoplax adhaerens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;