RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA724011" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA724011 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3261700 3261700 PRJNA724011_P_NODE_108483_length_242_cov_0.911243_g107460_i0 PRJNA724011 108483 242 0.911243 2.20520806 Zhejiang mamastrovirus 4 2920441 Viruses Viruses 58.4 4.69e-4   NTclustered gi|2203408083|gb|MW784070.1| 2920441 g107460 i0 100 0.384297520661157 31 0 13 0 161 191 6320 6290 MAG: Zhejiang mamastrovirus 4 isolate 7-333329, complete genome blastn 93 58.4 1 Viruses   Orthornavirae Pisuviricota Stelpaviricetes Stellavirales Astroviridae Mamastrovirus Zhejiang mamastrovirus 4
23664030 23664030 PRJNA724011_P_NODE_95339_length_250_cov_0.870056_g94316_i0 PRJNA724011 95339 250 0.870056 2.17514 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 141 4.7e-29   NTclustered gi|1698236883|gb|MN034603.1| 3003959 g94316 i0 83.784 9.42 148 24 59 0 3 150 10520 10667 MAG: Picornavirales sp. isolate H1_Bulk_Litter_5_scaffold_57 RNA-dependent RNA polymerase (H1BulkLitter557_000001) gene, complete cds; and hypothetical protein (H1BulkLitter557_000002) gene, partial cds blastn 2355 141 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;