RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA724011" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA724011 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10914725 10914725 PRJNA724011_P_NODE_50029_length_366_cov_2.416382_g49006_i0 PRJNA724011 50029 366 2.416382 8.84395812 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 93.5 2.05e-14   NTclustered gi|2794895333|ref|XM_067923466.1| 135588 g49006 i0 85.567 1.44535519125683 97 5 27 6 54 144 564 657 Histomonas meleagridis XYPPX repeat family protein (GO595_009747), partial mRNA blastn 529 93.5 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
14739869 14739869 PRJNA724011_P_NODE_70492_length_299_cov_1.730088_g69469_i0 PRJNA724011 70492 299 1.730088 5.17296312 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 60.2 1.66e-4   NTclustered gi|2806479399|ref|XM_068510944.1| 1144522 g69469 i0 100 0.581939799331104 32 0 11 0 204 235 1315 1284 Tritrichomonas foetus uncharacterized protein (TRFO_36632), partial mRNA blastn 174 60.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;