contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJNA724011" and tax_phylum = "Myxococcota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 710982 | 710982 | PRJNA724011_P_NODE_98321_length_248_cov_0.880000_g97298_i0 | PRJNA724011 | 98321 | 248 | 0.88 | 2.1824 | Sorangium cellulosum | 56 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|520999024|gb|CP003969.1| | 1254432 | g97298 | i0 | 100 | 0.116935483870968 | 29 | 0 | 12 | 0 | 123 | 151 | 14316068 | 14316040 | Sorangium cellulosum So0157-2, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 7089118 | 7089118 | PRJNA724011_P_NODE_101306_length_246_cov_0.890173_g100283_i0 | PRJNA724011 | 101306 | 246 | 0.890173 | 2.18982558 | Anaeromyxobacter dehalogenans | 161493 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|85772941|gb|CP000251.1| | 290397 | g100283 | i0 | 100 | 0.117886178861789 | 29 | 0 | 12 | 0 | 134 | 162 | 4964505 | 4964533 | Anaeromyxobacter dehalogenans 2CP-C, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Anaeromyxobacteraceae | Anaeromyxobacter | Anaeromyxobacter dehalogenans | ||
| 8363847 | 8363847 | PRJNA724011_P_NODE_30927_length_496_cov_1.423168_g29908_i0 | PRJNA724011 | 30927 | 496 | 1.423168 | 7.05891328 | Corallococcus sp. NCRR | 2996782 | Bacteria | Bacteria | 54.7 | 0.013 | NTclustered | gi|2415015785|gb|CP114039.1| | 2996782 | g29908 | i0 | 94.444 | 0.0725806451612903 | 36 | 1 | 7 | 1 | 142 | 176 | 8097474 | 8097509 | Corallococcus sp. NCRR chromosome, complete genome | blastn | 36 | 54.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Corallococcus | Corallococcus sp. NCRR | ||
| 10122363 | 10122363 | PRJNA724011_P_NODE_26288_length_549_cov_2.441176_g25272_i0 | PRJNA724011 | 26288 | 549 | 2.441176 | 13.40205624 | Sorangium | 39643 | Bacteria | Bacteria | 555 | 3.379999999999999e-153 | NTclustered | gi|507148211|ref|NR_103018.1| | 56 | g25272 | i0 | 85.045 | 120.577413479053 | 555 | 71 | 99 | 11 | 4 | 549 | 1135 | 1686 | Sorangium cellulosum strain So ce 56 23S ribosomal RNA gene, complete sequence | blastn | 66197 | 555 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 10914959 | 10914959 | PRJNA724011_P_NODE_82769_length_271_cov_2.333333_g81746_i0 | PRJNA724011 | 82769 | 271 | 2.333333 | 6.32333243 | Polyangium aurulentum | 2567896 | Bacteria | Bacteria | 52.8 | 0.025 | NTclustered | gi|2235996827|gb|CP079217.1| | 2567896 | g81746 | i0 | 100 | 0.103321033210332 | 28 | 0 | 10 | 0 | 242 | 269 | 3752336 | 3752309 | Polyangium aurulentum strain SDU3-1 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangium | Polyangium aurulentum | |||
| 13464609 | 13464609 | PRJNA724011_P_NODE_73011_length_293_cov_1.395455_g71988_i0 | PRJNA724011 | 73011 | 293 | 1.395455 | 4.08868315 | Pendulispora rubella | 2741070 | Bacteria | Bacteria | 335 | 2.409999999999999e-87 | NTclustered | gi|2698045512|gb|CP089929.1| | 2741070 | g71988 | i0 | 87.458 | 444.491467576792 | 295 | 32 | 99 | 5 | 1 | 292 | 7289711 | 7290003 | Pendulispora rubella strain MSr11368 chromosome, complete genome | blastn | 130236 | 335 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora rubella | ||
| 13464731 | 13464731 | PRJNA724011_P_NODE_90371_length_257_cov_1.255435_g89348_i0 | PRJNA724011 | 90371 | 257 | 1.255435 | 3.22646795 | Minicystis rosea | 888845 | Bacteria | Bacteria | 420 | 5.56e-113 | NTclustered | gi|1127353251|gb|CP016211.1| | 888845 | g89348 | i0 | 96.109 | 170.186770428016 | 257 | 10 | 100 | 0 | 1 | 257 | 15982273 | 15982017 | Minicystis rosea strain DSM 24000 chromosome, complete genome | blastn | 43738 | 420 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Minicystis | Minicystis rosea | |||
| 14739853 | 14739853 | PRJNA724011_P_NODE_68172_length_305_cov_2.189655_g67149_i0 | PRJNA724011 | 68172 | 305 | 2.189655 | 6.67844775 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 52.8 | 0.028 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g67149 | i0 | 100 | 0.0918032786885246 | 28 | 0 | 9 | 0 | 23 | 50 | 3572114 | 3572087 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 17288486 | 17288486 | PRJNA724011_P_NODE_15034_length_785_cov_2.132022_g14081_i0 | PRJNA724011 | 15034 | 785 | 2.132022 | 16.7363727 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 65.8 | 1.01e-5 | NTclustered | gi|2108369872|gb|CP070650.1| | 2026763 | g14081 | i0 | 91.489 | 0.110828025477707 | 47 | 4 | 6 | 0 | 530 | 576 | 1349515 | 1349469 | MAG: Myxococcales bacterium isolate bin861 chromosome | blastn | 87 | 65.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 21113450 | 21113450 | PRJNA724011_P_NODE_78477_length_280_cov_2.753623_g77454_i0 | PRJNA724011 | 78477 | 280 | 2.753623 | 7.7101444 | Archangium gephyra | 48 | Bacteria | Bacteria | 110 | 1.51e-19 | NTclustered | gi|2809295724|gb|CP102578.1| | 48 | g77454 | i0 | 90.361 | 6.35 | 83 | 8 | 30 | 0 | 80 | 162 | 3768038 | 3767956 | Archangium gephyra strain SDU49 chromosome, complete genome | blastn | 1778 | 110 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 21595928 | 21595928 | PRJNA724011_P_NODE_106777_length_243_cov_0.905882_g105754_i0 | PRJNA724011 | 106777 | 243 | 0.905882 | 2.20129326 | Sorangium | 39643 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|1566478966|gb|CP012672.1| | 56 | g105754 | i0 | 100 | 0.230452674897119 | 28 | 0 | 12 | 0 | 145 | 172 | 11986878 | 11986851 | Sorangium cellulosum strain So ce836 chromosome, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 22387829 | 22387829 | PRJNA724011_P_NODE_109138_length_241_cov_1.505952_g108115_i0 | PRJNA724011 | 109138 | 241 | 1.505952 | 3.62934432 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 412 | 8.64e-111 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g108115 | i0 | 97.51 | 267.850622406639 | 241 | 6 | 100 | 0 | 1 | 241 | 3944644 | 3944404 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 64552 | 412 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 22871547 | 22871547 | PRJNA724011_P_NODE_85838_length_265_cov_3.041667_g84815_i0 | PRJNA724011 | 85838 | 265 | 3.041667 | 8.06041755 | Sorangium | 39643 | Bacteria | Bacteria | 311 | 3.62e-80 | NTclustered | gi|1566495190|gb|CP012670.1| | 56 | g84815 | i0 | 87.636 | 78.988679245283 | 275 | 24 | 100 | 6 | 1 | 265 | 2995731 | 2995457 | Sorangium cellulosum strain So ceGT47 chromosome, complete genome | blastn | 20932 | 311 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 23663732 | 23663732 | PRJNA724011_P_NODE_51819_length_359_cov_1.076923_g50796_i0 | PRJNA724011 | 51819 | 359 | 1.076923 | 3.86615357 | Nannocystis punicea | 2995304 | Bacteria | Bacteria | 52.8 | 0.034 | NTclustered | gi|2415023655|gb|CP114040.1| | 2995304 | g50796 | i0 | 100 | 0.0779944289693593 | 28 | 0 | 8 | 0 | 67 | 94 | 13134384 | 13134357 | Nannocystis poenicansa strain FL3 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Nannocystales | Nannocystaceae | Nannocystis | Nannocystis punicea | |||
| 23664066 | 23664066 | PRJNA724011_P_NODE_99059_length_248_cov_0.880000_g98036_i0 | PRJNA724011 | 99059 | 248 | 0.88 | 2.1824 | Archangium gephyra | 48 | Bacteria | Bacteria | 219 | 2.0899999999999994e-52 | NTclustered | gi|827418478|gb|CP011509.1| | 48 | g98036 | i0 | 83.913 | 79.8064516129032 | 230 | 35 | 92 | 2 | 20 | 248 | 8321998 | 8321770 | Archangium gephyra strain DSM 2261, complete genome | blastn | 19792 | 219 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 24937197 | 24937197 | PRJNA724011_P_NODE_49460_length_369_cov_1.543919_g48437_i0 | PRJNA724011 | 49460 | 369 | 1.543919 | 5.69706111 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 433 | 1.0699999999999999e-116 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g48437 | i0 | 87.903 | 117.184281842818 | 372 | 39 | 99 | 5 | 2 | 369 | 7915786 | 7915417 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 43241 | 433 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;