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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA724011" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA724011 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2469118 2469118 PRJNA724011_P_NODE_23742_length_586_cov_2.994152_g22727_i0 PRJNA724011 23742 586 2.994152 17.54573072 Tremula 1938488 SAR_Eukaryotes SAR_Eukaryotes 418 4.959999999999998e-112   NTclustered gi|194272494|gb|EU567287.1| 175275 g22727 i0 84.813 71.6262798634812 428 51 72 11 166 586 648 1068 Uncultured cercozoan isolate lb9 18S ribosomal RNA gene, partial sequence blastn 41973 418 1 Eukaryota Sar   Cercozoa         uncultured Cercozoa
3745495 3745495 PRJNA724011_P_NODE_108783_length_241_cov_175.755952_g107760_i0 PRJNA724011 108783 241 175.755952 423.57184432 root 1 Root_unresolved Root_unresolved 381 2.4399999999999996e-101   NTclustered gi|238617605|gb|FJ973380.1| 45107 g107760 i0 95.436 99.7676348547718 241 8 99 3 4 241 2386 2146 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 24044 381 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
7089691 7089691 PRJNA724011_P_NODE_86446_length_264_cov_2.141361_g85423_i0 PRJNA724011 86446 264 2.141361 5.65319304 Euglypha rotunda 39714 SAR_Eukaryotes SAR_Eukaryotes 344 3.55e-90   NTclustered gi|145558660|gb|EF517356.1| 39714 g85423 i0 90.152 15.6174242424242 264 26 100 0 1 264 482 745 Euglypha rotunda strain CCAP 1520/1 actin gene, partial cds blastn 4123 344 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Euglyphidae Euglypha Euglypha rotunda
10914792 10914792 PRJNA724011_P_NODE_60509_length_327_cov_2.425197_g59486_i0 PRJNA724011 60509 327 2.425197 7.93039419 Heteromita globosa 45107 SAR_Eukaryotes SAR_Eukaryotes 466 9.27e-127   NTclustered gi|238617605|gb|FJ973380.1| 45107 g59486 i0 92.355 99.3761467889908 327 25 100 0 1 327 1241 1567 Heteromita globosa strain ATCC 50780 28S ribosomal RNA gene, partial sequence blastn 32496 466 1 Eukaryota Sar   Cercozoa   Cercomonadida Heteromitidae Heteromita Heteromita globosa
12190086 12190086 PRJNA724011_P_NODE_62630_length_321_cov_1.403226_g61607_i0 PRJNA724011 62630 321 1.403226 4.50435546 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 287 7.580000000000001e-73   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g61607 i0 83.912 58.0560747663551 317 34 98 9 1 315 3685 3986 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 18636 287 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
14739972 14739972 PRJNA724011_P_NODE_85812_length_265_cov_4.619792_g84789_i0 PRJNA724011 85812 265 4.619792 12.2424488 Paulinella micropora 1928728 SAR_Eukaryotes SAR_Eukaryotes 252 2.22e-62   NTclustered gi|1389527545|dbj|LC383945.1| 1928728 g84789 i0 87.85 81.6943396226415 214 26 81 0 1 214 462 249 Paulinella micropora gene for actin, complete cds blastn 21649 252 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Paulinellidae Paulinella Paulinella micropora
16012920 16012920 PRJNA724011_P_NODE_111233_length_234_cov_2.434783_g110210_i0 PRJNA724011 111233 234 2.434783 5.69739222 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 248 2.49e-61   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g110210 i0 90.909 64.9444444444444 187 14 79 3 1 186 3685 3869 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 15197 248 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
16013100 16013100 PRJNA724011_P_NODE_35833_length_452_cov_3.292876_g34811_i0 PRJNA724011 35833 452 3.292876 14.88379952 Euglypha rotunda 39714 SAR_Eukaryotes SAR_Eukaryotes 625 2.06e-174   NTclustered gi|145558660|gb|EF517356.1| 39714 g34811 i0 91.759 96.9181415929203 449 37 99 0 3 451 299 747 Euglypha rotunda strain CCAP 1520/1 actin gene, partial cds blastn 43807 625 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Euglyphidae Euglypha Euglypha rotunda
17288960 17288960 PRJNA724011_P_NODE_89614_length_258_cov_1.664865_g88591_i0 PRJNA724011 89614 258 1.664865 4.2953517 Esquamula lacrimiformis 1176540 SAR_Eukaryotes SAR_Eukaryotes 163 1.04e-35   NTclustered gi|409971369|dbj|AB714271.1| 1176540 g88591 i0 79.424 18.9767441860465 243 41 94 8 16 258 4018 3785 Esquamula lacrimiformis gene for 28S ribosomal RNA, partial sequence blastn 4896 163 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida   Esquamula Esquamula lacrimiformis
19837574 19837574 PRJNA724011_P_NODE_45036_length_390_cov_4.495268_g44013_i0 PRJNA724011 45036 390 4.495268 17.5315452 Euglypha rotunda 39714 SAR_Eukaryotes SAR_Eukaryotes 483 1.12e-131   NTclustered gi|145558660|gb|EF517356.1| 39714 g44013 i0 89.147 95.9615384615385 387 42 99 0 1 387 349 735 Euglypha rotunda strain CCAP 1520/1 actin gene, partial cds blastn 37425 483 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Euglyphidae Euglypha Euglypha rotunda
19837664 19837664 PRJNA724011_P_NODE_56036_length_343_cov_0.851852_g55013_i0 PRJNA724011 56036 343 0.851852 2.92185236 Cercomonas sp. ATCC 50316 45110 SAR_Eukaryotes SAR_Eukaryotes 303 8.11e-78   NTclustered gi|27734378|gb|AY099144.1| 45110 g55013 i0 91.743 194.419825072886 218 18 64 0 122 339 426 209 Cercomonas ATCC50316 isolate pub6 polyubiquitin gene, partial cds blastn 66686 303 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. ATCC 50316
23664043 23664043 PRJNA724011_P_NODE_96719_length_249_cov_0.875000_g95696_i0 PRJNA724011 96719 249 0.875 2.17875 Thaumatomonas sp. TMT002 407209 SAR_Eukaryotes SAR_Eukaryotes 195 3.5399999999999996e-45   NTclustered gi|116222176|gb|DQ980464.1| 407209 g95696 i0 80.972 30.1044176706827 247 45 99 2 4 249 964 719 Thaumatomonas sp. TMT002 Hsp90 mRNA, partial cds blastn 7496 195 1 Eukaryota Sar   Cercozoa Imbricatea Thaumatomonadida Thaumatomastigidae Thaumatomonas Thaumatomonas sp. TMT002

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;