RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA724011" and tax_phylum = "Bryozoa"

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tax_superkingdom 1

tax_phylum 1

  • Bryozoa · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA724011 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18562317 18562317 PRJNA724011_P_NODE_26735_length_543_cov_26.731915_g25719_i0 PRJNA724011 26735 543 26.731915 145.15429845 Membranipora membranacea 95170 Bryozoa other_Eukaryota 575 2.559999999999999e-159   NTclustered gi|2320635325|gb|ON868447.1| 95170 g25719 i0 89.451 84.0828729281768 455 48 84 0 17 471 472 18 Membranipora membranacea calmodulin-like protein 1 mRNA, complete cds blastn 45657 575 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Membraniporidae Membranipora Membranipora membranacea
22388008 22388008 PRJNA724011_P_NODE_31958_length_485_cov_68.325243_g30939_i0 PRJNA724011 31958 485 68.325243 331.37742855 Membranipora membranacea 95170 Bryozoa other_Eukaryota 451 3.99e-122   NTclustered gi|2320635325|gb|ON868447.1| 95170 g30939 i0 84.944 86.9917525773196 445 67 92 0 40 484 19 463 Membranipora membranacea calmodulin-like protein 1 mRNA, complete cds blastn 42191 451 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Membraniporidae Membranipora Membranipora membranacea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;