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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA724011" and tax_clade = "SAR86 cluster"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • SAR86 cluster · 5 ✖

bioproject 1

  • PRJNA724011 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3261727 3261727 PRJNA724011_P_NODE_123_length_5339_cov_901.081276_g84_i1 PRJNA724011 123 5339 901.081276 48108.72932564 SAR86 cluster bacterium 2030880 Bacteria Bacteria 56.5 0.043   NTclustered gi|2252311810|gb|CP097969.1| 2030880 g84 i1 100 0.0112380595617157 30 0 1 0 3877 3906 1314553 1314524 SAR86 cluster bacterium isolate SAR86-D19 chromosome, complete genome blastn 60 56.5 1 Bacteria SAR86 cluster Pseudomonadati Pseudomonadota Gammaproteobacteria       SAR86 cluster bacterium
4538819 4538819 PRJNA724011_P_NODE_124_length_5327_cov_894.716026_g84_i2 PRJNA724011 124 5327 894.716026 47661.52270502 SAR86 cluster bacterium 2030880 Bacteria Bacteria 56.5 0.043   NTclustered gi|2252311810|gb|CP097969.1| 2030880 g84 i2 100 0.011263375258119 30 0 1 0 1422 1451 1314524 1314553 SAR86 cluster bacterium isolate SAR86-D19 chromosome, complete genome blastn 60 56.5 1 Bacteria SAR86 cluster Pseudomonadati Pseudomonadota Gammaproteobacteria       SAR86 cluster bacterium
18562225 18562225 PRJNA724011_P_NODE_115_length_5444_cov_851.309440_g84_i0 PRJNA724011 115 5444 851.30944 46345.2859136 SAR86 cluster bacterium 2030880 Bacteria Bacteria 56.5 0.044   NTclustered gi|2252311810|gb|CP097969.1| 2030880 g84 i0 100 0.0110213078618663 30 0 1 0 1434 1463 1314524 1314553 SAR86 cluster bacterium isolate SAR86-D19 chromosome, complete genome blastn 60 56.5 1 Bacteria SAR86 cluster Pseudomonadati Pseudomonadota Gammaproteobacteria       SAR86 cluster bacterium
19837379 19837379 PRJNA724011_P_NODE_156_length_4963_cov_741.166258_g84_i3 PRJNA724011 156 4963 741.166258 36784.08138454 SAR86 cluster bacterium 2030880 Bacteria Bacteria 56.5 0.04   NTclustered gi|2252311810|gb|CP097969.1| 2030880 g84 i3 100 0.0120894620189402 30 0 1 0 1058 1087 1314524 1314553 SAR86 cluster bacterium isolate SAR86-D19 chromosome, complete genome blastn 60 56.5 1 Bacteria SAR86 cluster Pseudomonadati Pseudomonadota Gammaproteobacteria       SAR86 cluster bacterium
24936966 24936966 PRJNA724011_P_NODE_160_length_4909_cov_750.243383_g84_i4 PRJNA724011 160 4909 750.243383 36829.44767147 SAR86 cluster bacterium 2030880 Bacteria Bacteria 56.5 0.04   NTclustered gi|2252311810|gb|CP097969.1| 2030880 g84 i4 100 0.0122224485638623 30 0 1 0 1004 1033 1314524 1314553 SAR86 cluster bacterium isolate SAR86-D19 chromosome, complete genome blastn 60 56.5 1 Bacteria SAR86 cluster Pseudomonadati Pseudomonadota Gammaproteobacteria       SAR86 cluster bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;