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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA724011" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 4 ✖

bioproject 1

  • PRJNA724011 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1986827 1986827 PRJNA724011_P_NODE_70702_length_299_cov_1.017699_g69679_i0 PRJNA724011 70702 299 1.017699 3.04292001 Thecamonas trahens 529818 Root_unresolved Root_unresolved 63.9 1.28e-5   NTclustered gi|923139112|ref|XM_013907567.1| 461836 g69679 i0 91.489 0.929765886287625 47 2 15 2 208 253 1582 1627 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_00160), mRNA blastn 278 63.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
4538795 4538795 PRJNA724011_P_NODE_109444_length_241_cov_0.916667_g108421_i0 PRJNA724011 109444 241 0.916667 2.20916747 Thecamonas trahens 529818 Root_unresolved Root_unresolved 111 3.53e-20   NTclustered gi|923130938|ref|XM_013903481.1| 461836 g108421 i0 79.739 1.18257261410788 153 31 63 0 44 196 863 1015 Thecamonas trahens ATCC 50062 GDP-L-fucose synthase (AMSG_04147), mRNA blastn 285 111 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
12190227 12190227 PRJNA724011_P_NODE_8430_length_1087_cov_14.652860_g7710_i0 PRJNA724011 8430 1087 14.65286 159.2765882 Thecamonas trahens 529818 Root_unresolved Root_unresolved 422 7.31e-113   NTclustered gi|923134252|ref|XM_013905138.1| 461836 g7710 i0 76.857 17.1425942962282 821 144 73 32 98 895 200 997 Thecamonas trahens ATCC 50062 adenine nucleotide translocator (AMSG_02751), mRNA blastn 18634 422 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
16013494 16013494 PRJNA724011_P_NODE_913_length_2644_cov_23.352392_g764_i0 PRJNA724011 913 2644 23.352392 617.43724448 Thecamonas trahens 529818 Root_unresolved Root_unresolved 60.2 0.002   NTclustered gi|923135816|ref|XM_013905920.1| 461836 g764 i0 90.909 0.0166414523449319 44 4 2 0 469 512 1372 1415 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_01870), partial mRNA blastn 44 60.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;